ppiB:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000023432 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000000456 (score: 0.673)
  • ENSANGP00000016027 (score: 0.335)
  • ENSANGP00000014257 (score: 0.335)
  • ENSANGP00000027110 (score: 0.169)
  • ENSANGP00000010906 (score: 0.110)
  • ENSANGP00000015053 (score: 0.091)
  • ENSANGP00000020778 (score: 0.083)
  • ENSANGP00000011942 (score: 0.079)
  • ENSANGP00000018327 (score: 0.075)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000007038 (score: 1.000; bootstrap: 71%)
  • ENSAPMP00000009635 (score: 0.053)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G44600 (score: 1.000; bootstrap: 65%)
  • AT2G36130 (score: 0.067)
  • AT1G01940 (score: 0.064)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000003071 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000029375 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000021957 (score: 0.938)
  • ENSBTAP00000002051 (score: 0.264)
  • ENSBTAP00000012520 (score: 0.205)
  • ENSBTAP00000015924 (score: 0.176)
  • ENSBTAP00000022213 (score: 0.165)
  • ENSBTAP00000022582 (score: 0.161)
  • ENSBTAP00000003624 (score: 0.158)
  • ENSBTAP00000039852 (score: 0.154)
  • ENSBTAP00000022180 (score: 0.154)
  • ENSBTAP00000001620 (score: 0.147)
  • ENSBTAP00000006026 (score: 0.143)
  • ENSBTAP00000000178 (score: 0.121)
  • ENSBTAP00000021601 (score: 0.103)
  • ENSBTAP00000010705 (score: 0.077)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00029907 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00000891 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000022641 (score: 1.000; bootstrap: 64%)
  • ENSCAFP00000005135 (score: 0.096)
  • ENSCAFP00000002060 (score: 0.071)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000014201 (score: 1.000; bootstrap: 60%)
  • ENSCINP00000010020 (score: 0.070)
  • ENSCINP00000015590 (score: 0.060)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040625-159 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040625-229 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040625-222 (score: 0.371)
  • ZDB-GENE-040426-1096 (score: 0.371)
  • ZDB-CDNA-040425-2050 (score: 0.239)
  • ZDB-GENE-040426-1118 (score: 0.239)
  • ZDB-CDNA-051009-3 (score: 0.235)
  • ZDB-GENE-051009-1 (score: 0.235)
  • ZDB-CDNA-040425-1462 (score: 0.163)
  • ZDB-GENE-030131-6251 (score: 0.163)
  • ZDB-CDNA-040425-2028 (score: 0.124)
  • ZDB-CDNA-040625-54 (score: 0.120)
  • ZDB-GENE-040625-34 (score: 0.120)
  • ZDB-CDNA-040625-43 (score: 0.108)
  • ZDB-CDNA-040425-1495 (score: 0.108)
  • ZDB-GENE-030131-7459 (score: 0.108)
  • ZDB-CDNA-040912-54 (score: 0.104)
  • ZDB-GENE-040912-52 (score: 0.104)
  • ZDB-CDNA-040625-180 (score: 0.100)
  • ZDB-CDNA-040425-2902 (score: 0.100)
  • ZDB-GENE-040426-1955 (score: 0.100)
  • ZDB-CDNA-040625-187 (score: 0.096)
  • ZDB-GENE-040625-127 (score: 0.096)
  • ZDB-CDNA-040425-1722 (score: 0.092)
  • ZDB-GENE-040426-796 (score: 0.092)
  • ZDB-GENE-050522-70 (score: 0.072)
  • ZDB-CDNA-050809-2 (score: 0.068)
  • ZDB-CDNA-040425-3769 (score: 0.068)
  • ZDB-GENE-040426-2822 (score: 0.068)
  • ZDB-GENE-030131-8556 (score: 0.068)
  • ZDB-CDNA-050522-70 (score: 0.060)
  • ZDB-CDNA-051030-45 (score: 0.056)
  • ZDB-GENE-051030-126 (score: 0.056)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0184037 (score: 1.000; bootstrap: 91%)
  • DDB0218595 (score: 0.285)
  • DDB0216615 (score: 0.272)
  • DDB0191208 (score: 0.230)
  • DDB0202158 (score: 0.157)
  • DDB0215524 (score: 0.115)
  • DDB0185614 (score: 0.077)
  • DDB0215377 (score: 0.072)
  • DDB0205799 (score: 0.064)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0035141 (score: 1.000; bootstrap: 100%)
  • FBgn0034109 (score: 1.000; bootstrap: 100%)
  • FBgn0035027 (score: 1.000; bootstrap: 100%)
  • FBgn0036207 (score: 0.239)
  • FBgn0034753 (score: 0.211)
  • FBgn0033527 (score: 0.158)
  • FBgn0036415 (score: 0.147)
  • FBgn0004432 (score: 0.147)
  • FBgn0033089 (score: 0.147)
  • FBgn0002936 (score: 0.147)
  • FBgn0039581 (score: 0.130)
  • FBgn0028382 (score: 0.109)
  • FBgn0027617 (score: 0.102)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA20560-PA (score: 1.000; bootstrap: 100%)
  • GA17492-PA (score: 1.000; bootstrap: 100%)
  • GA12606-PA (score: 0.095)
  • GA11192-PA (score: 0.094)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000023753 (score: 1.000; bootstrap: 53%)
  • ENSGALP00000013375 (score: 0.069)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000334553 (score: 1.000; bootstrap: 84%)
  • ENSP00000244367 (score: 0.073)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000024384 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000017942 (score: 1.000; bootstrap: 62%)
  • ENSMODP00000018799 (score: 0.100)
  • ENSMODP00000016893 (score: 0.070)

From Inparanoid:20070104

Mus musculus

  • MGI:1917475 (score: 1.000; bootstrap: 100%)
  • MGI:2443069 (score: 1.000; bootstrap: 100%)
  • MGI:2447857 (score: 0.387)
  • MGI:1916066 (score: 0.242)
  • MGI:1914535 (score: 0.242)
  • MGI:1914668 (score: 0.199)
  • MGI:1914988 (score: 0.172)
  • MGI:3642937 (score: 0.156)
  • MGI:2445173 (score: 0.141)
  • MGI:97346 (score: 0.141)
  • MGI:3645078 (score: 0.129)
  • MGI:97751 (score: 0.125)
  • MGI:3647551 (score: 0.121)
  • MGI:97749 (score: 0.121)
  • MGI:106499 (score: 0.117)
  • MGI:3648545 (score: 0.105)
  • MGI:97750 (score: 0.102)
  • MGI:894323 (score: 0.090)
  • MGI:1917118 (score: 0.090)
  • MGI:2145814 (score: 0.078)

From Inparanoid:20070104

Oryza gramene

  • Q6ZJ09 (score: 1.000; bootstrap: 81%)
  • Q6ZJ10 (score: 0.576)
  • Q7XXQ2 (score: 0.373)
  • Q93VG0 (score: 0.103)
  • Q9SNN7 (score: 0.098)
  • Q6XPZ4 (score: 0.073)
  • Q75M32 (score: 0.072)
  • Q6XPZ6 (score: 0.070)
  • Q9AQU0 (score: 0.066)
  • P21569 (score: 0.056)
  • Q6ZH98 (score: 0.055)
  • Q40673 (score: 0.055)
  • Q40674 (score: 0.052)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000024309 (score: 1.000; bootstrap: 81%)
  • ENSPTRP00000030937 (score: 0.102)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000018284 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000016863 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000035467 (score: 0.399)
  • ENSRNOP00000000630 (score: 0.256)
  • ENSRNOP00000017832 (score: 0.252)
  • ENSRNOP00000021437 (score: 0.209)
  • ENSRNOP00000035797 (score: 0.182)
  • ENSRNOP00000010216 (score: 0.155)
  • ENSRNOP00000009179 (score: 0.128)
  • ENSRNOP00000023485 (score: 0.128)
  • ENSRNOP00000009407 (score: 0.128)
  • ENSRNOP00000022828 (score: 0.112)
  • ENSRNOP00000043488 (score: 0.112)
  • ENSRNOP00000037606 (score: 0.109)
  • ENSRNOP00000020104 (score: 0.105)
  • ENSRNOP00000001044 (score: 0.101)
  • ENSRNOP00000003646 (score: 0.097)
  • ENSRNOP00000014382 (score: 0.093)
  • ENSRNOP00000047833 (score: 0.081)
  • ENSRNOP00000032159 (score: 0.066)
  • ENSRNOP00000042983 (score: 0.062)
  • ENSRNOP00000047822 (score: 0.058)
  • ENSRNOP00000045923 (score: 0.050)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR304C (score: 1.000; bootstrap: 100%)
  • YHR057C (score: 0.406)
  • YDR155C (score: 0.301)
  • YML078W (score: 0.278)
  • YLR216C (score: 0.245)
  • YJR032W (score: 0.115)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC5534 (score: 1.000; bootstrap: 75%)
  • SPBP8B75 (score: 0.057)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000176289 (score: 1.000; bootstrap: 54%)
  • NEWSINFRUP00000175635 (score: 0.055)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00028569001 (score: 1.000; bootstrap: 66%)
  • GSTENP00029024001 (score: 0.105)
  • GSTENP00025345001 (score: 0.055)
  • GSTENP00010751001 (score: 0.054)
  • GSTENP00016428001 (score: 0.052)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000017644 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

PPIB

From SHIGELLACYC

E. coli O157

PPIB

From ECOO157CYC

edit table


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:50891

Panther (EcoliWiki Page)

PTHR11071:SF29

Pfam (EcoliWiki Page)

PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

EcoCyc

EcoCyc:EG10758

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10758

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000749

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0751

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001806

Escherichia coli str. K-12 substr. MG1655

edit table

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ppiB:Evolution&oldid=1389217"