mdh:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020184 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000014039 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G09660 (score: 1.000; bootstrap: 100%)
  • AT2G22780 (score: 0.656)
  • AT1G53240 (score: 0.242)
  • AT3G15020 (score: 0.239)
  • AT3G47520 (score: 0.199)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000012454 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00035534 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00003162 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000019927 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000009255 (score: 0.792)
  • ENSCAFP00000008232 (score: 0.169)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000017906 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2143 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3090 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230188 (score: 1.000; bootstrap: 100%)
  • DDB0230186 (score: 1.000; bootstrap: 100%)
  • DDB0230187 (score: 0.463)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0038587 (score: 1.000; bootstrap: 100%)
  • FBgn0036328 (score: 0.062)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA20754-PA (score: 1.000; bootstrap: 100%)
  • GA10541-PA (score: 0.071)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000003012 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000327070 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000012976 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000017108 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000021862 (score: 0.177)

From Inparanoid:20070104

Mus musculus

  • MGI:97050 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q42972 (score: 1.000; bootstrap: 100%)
  • Q7XZW5 (score: 0.685)
  • Q7XZE9 (score: 0.285)
  • Q6F361 (score: 0.285)
  • Q94JA2 (score: 0.282)
  • Q7FSL4 (score: 0.282)
  • Q8H4E0 (score: 0.207)
  • Q6YWL3 (score: 0.196)
  • Q5QLS8 (score: 0.194)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000033039 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000001958 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YKL085W (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC3068c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000136061 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00035367001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000019672 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

MDH

From SHIGELLACYC

E. coli O157

MDH

From ECOO157CYC


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain

Pfam (EcoliWiki Page)

PF00056 lactate/malate dehydrogenase, NAD binding domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Panther (EcoliWiki Page)

PTHR11540:SF26

Superfamily (EcoliWiki Page)

SUPERFAMILY:56327

EcoCyc

EcoCyc:EG10576

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10576

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000569

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0571

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010613

Escherichia coli str. K-12 substr. MG1655

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]