hslR:Gene Product(s)
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
HslR |
|---|---|
| Synonyms |
ribosome-associated heat shock protein Hsp15[1], B3400[2][1], YrfH[2][1], HslR[2][1], Hsp15[2][1] , ECK3387, JW3363, yrfH, b3400 |
| Product description |
heat shock protein Hsp15[2][3] Hsp15, a heat shock protein that binds free 50S subunits; binds RNA and DNA[4] |
| EC number (for enzymes) |
|
| edit table |
<protect></protect>
Notes
Function
<protect>
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0009408 |
response to heat |
IEP: Inferred from Expression Pattern |
P |
complete | ||||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
rpsB |
Experiment(s):EBI-881287, EBI-888700 | ||
|
Protein |
rplI |
Experiment(s):EBI-888700 | ||
|
Protein |
rplM |
Experiment(s):EBI-888700 | ||
|
Protein |
rplN |
Experiment(s):EBI-888700 | ||
|
Protein |
rplS |
Experiment(s):EBI-888700 | ||
|
Protein |
rplV |
Experiment(s):EBI-888700 | ||
|
Protein |
rpmB |
Experiment(s):EBI-888700 | ||
|
Protein |
rpsC |
Experiment(s):EBI-888700 | ||
|
Protein |
rpsE |
Experiment(s):EBI-888700 | ||
|
Protein |
rpsG |
Experiment(s):EBI-888700 | ||
|
Protein |
rpsJ |
Experiment(s):EBI-888700 | ||
|
Protein |
sbcC |
Experiment(s):EBI-888700 | ||
|
Protein |
yagG |
Experiment(s):EBI-888700 | ||
|
Protein |
ycfS |
Experiment(s):EBI-888700 | ||
|
Protein |
ydhA |
Experiment(s):EBI-888700 | ||
|
Protein |
phoB |
Experiment(s):EBI-1145795 | ||
|
Protein |
rplD |
Experiment(s):EBI-1145795 | ||
|
Protein |
rho |
Experiment(s):EBI-1145795 | ||
|
Protein |
dnaK |
Experiment(s):EBI-1145795 | ||
|
Protein |
rplB |
Experiment(s):EBI-1145795 | ||
|
Protein |
rtcB |
Experiment(s):EBI-1145795 | ||
|
Protein |
rplA |
Experiment(s):EBI-1145795 | ||
|
Protein |
rpsD |
Experiment(s):EBI-1145795 | ||
|
Protein |
sbcC |
LCMS(ID Probability):99.0 | ||
|
Protein |
ycfS |
LCMS(ID Probability):99.0 | ||
|
Protein |
yagG |
LCMS(ID Probability):99.0 | ||
|
Protein |
mliC |
LCMS(ID Probability):99.0 | ||
| edit table |
</protect>
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
<protect></protect>
Notes
Structure and Physical Properties
<protect>
Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MKEKPAVEVR LDKWLWAARF YKTRALAREM IEGGKVHYNG QRSKPSKIVE LNATLTLRQG NDERTVIVKA ITEQRRPASE AALLYEETAE SVEKREKMAL ARKLNALTMP HPDRRPDKKE RRDLLRFKHG DSE |
| Length |
133 |
| Mol. Wt |
15.495 kDa |
| pI |
10.4 (calculated) |
| Extinction coefficient |
15,470 (calc based on 3 Y, 2 W, and 0 C residues) |
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
|
Structure
| </protect>
Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
<protect></protect>
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
| edit table |
<protect></protect>
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Chuang, SE & Blattner, FR (1993) Characterization of twenty-six new heat shock genes of Escherichia coli. J. Bacteriol. 175 5242-52 PubMed
- ↑ 6.00 6.01 6.02 6.03 6.04 6.05 6.06 6.07 6.08 6.09 6.10 6.11 6.12 6.13 6.14 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
- ↑ 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
- ↑ 8.0 8.1 8.2 8.3 Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
- ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
Categories
