frlC:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

FrlC

Synonyms

predicted isomerase[1], B4474[2][1], YhfP[2][1], YhfO[2][1], FrlC[2][1] , ECK3360, JW5699, yhfO, yhfP, b4474

Product description

fructoselysine 3-epimerase[2][3];

Component of fructoselysine 3-epimerase[3]

Fructoselysine 3-epimerase; interconverts fructoselysine and psicoselysine, allowing psicoselysine catabolism via the frl pathway[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of fructoselysine 3-epimerase

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MKTGMFTCGH QRLPIEHAFR DASELGYDGI EIWGGRPHAF APDLKAGGIK QIKALAQTYQ
MPIIGYTPET NGYPYNMMLG DEHMRRESLD MIKLAMDMAK EMNAGYTLIS AAHAGYLTPP
NVIWGRLAEN LSELCEYAEN IGMDLILEPL TPYESNVVCN ANDVLHALAL VPSPRLFSMV
DICAPYVQAE PVMSYFDKLG DKLRHLHIVD SDGASDTHYI PGEGKMPLRE LMRDIIERGY
EGYCTVELVT MYMNEPRLYA RQALERFRAL LPEDER
Length

276

Mol. Wt

31.169 kDa

pI

5.0 (calculated)

Extinction coefficient

34,840 - 35,465 (calc based on 16 Y, 2 W, and 5 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

19..226

PF01261 Xylose isomerase-like TIM barrel

PMID:19920124[5]

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Structure
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Structures

<beststructure> gene=frlC taxon=12017 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:49176341

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:2847758

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0174114

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P45541

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7724

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12910

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:2847758

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004268

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2747

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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