flk:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

Flk

Synonyms

predicted flagella assembly protein[1], B2321[2][1], Flk[2][1], Div[2][1] , div, ECK2315, JW2318, rflH, b2321

Product description

predicted flagella assembly protein[2][3]

Prevents premature secretion of FlgM; senses flagellar assembly stage[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005886

plasma membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0997

C

Seeded from EcoCyc (v14.0)

complete

GO:0005886

plasma membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-1003

C

Seeded from EcoCyc (v14.0)

complete

GO:0016020

membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0472

C

Seeded from EcoCyc (v14.0)

complete

GO:0016021

integral to membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0812

C

Seeded from EcoCyc (v14.0)

complete

GO:0016021

integral to membrane

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-9904

C

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

rplB

PMID:16606699[5]

Experiment(s):EBI-1142560

Protein

glpD

PMID:16606699[5]

Experiment(s):EBI-1142560

Protein

metC

PMID:16606699[5]

Experiment(s):EBI-1142560

Protein

yfcM

PMID:19402753[6]

LCMS(ID Probability):99.6

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MIQPISGPPP GQPPGQGDNL PSGTGNQPLS SQQRTSLESL MTKVTSLTQQ QRAELWAGIR
HDIGLSGDSP LLSRHFPAAE HNLAQRLLAA QKSHSARQLL AQLGEYLRLG NNRQAVTDYI
RHNFGQTPLN QLSPEQLKTI LTLLQEGKMV IPQPQQREAT DRPLLPAEHN ALKQLVTKLA
AATGEPSKQI WQSMLELSGV KDGELIPAKL FNHLVTWLQA RQTLSQQNTP TLESLQMTLK
QPLDASELAA LSAYIQQKYG LSAQSSLSSA QAEDILNQLY QRRVKGIDPR VMQPLLNPFP
PMMDTLQNMA TRPALWILLV AIILMLVWLV R
Length

331

Mol. Wt

36.669 kDa

pI

9.9 (calculated)

Extinction coefficient

34,950 (calc based on 5 Y, 5 W, and 0 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=flk taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16130256

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946776

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007667

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P15286

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10229

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10229

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946776

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000223

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0225

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  6. ↑ Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed

Categories

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