fadE:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
FadE |
|---|---|
| Synonyms |
acyl coenzyme A dehydrogenase[1], B0221[2][1], FadE[2][1], YafH[2][1], FadF[2][1] , ECK0222, fadF, JW5020, yafH, b0221 |
| Product description |
Medium-long-chain fatty acyl-CoA dehydrogenase[3] |
| EC number (for enzymes) | |
| edit table |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0016021 |
integral to membrane |
C |
Seeded from Riley et al 2006 [1]. |
Missing: evidence, reference | ||||
| GO:0003995 |
acyl-CoA dehydrogenase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0003995 |
acyl-CoA dehydrogenase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0003995 |
acyl-CoA dehydrogenase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0006629 |
lipid metabolic process |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0006631 |
fatty acid metabolic process |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016491 |
oxidoreductase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016491 |
oxidoreductase activity |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016627 |
oxidoreductase activity, acting on the CH-CH group of donors |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016627 |
oxidoreductase activity, acting on the CH-CH group of donors |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016627 |
oxidoreductase activity, acting on the CH-CH group of donors |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016627 |
oxidoreductase activity, acting on the CH-CH group of donors |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0033539 |
fatty acid beta-oxidation using acyl-CoA dehydrogenase |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0050660 |
FAD binding |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0055114 |
oxidation reduction |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MVRPPTSKGL FVMMILSILA TVVLLGALFY HRVSLFISSL ILLAWTAALG VAGLWSAWVL VPLAIILVPF NFAPMRKSMI SAPVFRGFRK VMPPMSRTEK EAIDAGTTWW EGDLFQGKPD WKKLHNYPQP RLTAEEQAFL DGPVEEACRM ANDFQITHEL ADLPPELWAY LKEHRFFAMI IKKEYGGLEF SAYAQSRVLQ KLSGVSGILA ITVGVPNSLG PGELLQHYGT DEQKDHYLPR LARGQEIPCF ALTSPEAGSD AGAIPDTGIV CMGEWQGQQV LGMRLTWNKR YITLAPIATV LGLAFKLSDP EKLLGGAEDL GITCALIPTT TPGVEIGRRH FPLNVPFQNG PTRGKDVFVP IDYIIGGPKM AGQGWRMLVE CLSVGRGITL PSNSTGGVKS VALATGAYAH IRRQFKISIG KMEGIEEPLA RIAGNAYVMD AAASLITYGI MLGEKPAVLS AIVKYHCTHR GQQSIIDAMD ITGGKGIMLG QSNFLARAYQ GAPIAITVEG ANILTRSMMI FGQGAIRCHP YVLEEMEAAK NNDVNAFDKL LFKHIGHVGS NKVRSFWLGL TRGLTSSTPT GDATKRYYQH LNRLSANLAL LSDVSMAVLG GSLKRRERIS ARLGDILSQL YLASAVLKRY DDEGRNEADL PLVHWGVQDA LYQAEQAMDD LLQNFPNRVV AGLLNVVIFP TGRHYLAPSD KLDHKVAKIL QVPNATRSRI GRGQYLTPSE HNPVGLLEEA LVDVIAADPI HQRICKELGK NLPFTRLDEL AHNALVKGLI DKDEAAILVK AEESRLRSIN VDDFDPEELA TKPVKLPEKV RKVEAA |
| Length |
826 |
| Mol. Wt |
90.54 kDa |
| pI |
8.5 (calculated) |
| Extinction coefficient |
98,780 - 99,780 (calc based on 22 Y, 12 W, and 8 C residues) |
| edit table |
Domains/Motifs/Modification Sites
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 4.0 4.1 4.2 4.3 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
Categories
- GO:0016021 ! integral component of membrane
- GO:0003995 ! acyl-CoA dehydrogenase activity
- GO:0006629 ! lipid metabolic process
- GO:0006631 ! fatty acid metabolic process
- GO:0016491 ! oxidoreductase activity
- GO:0016627 ! oxidoreductase activity, acting on the CH-CH group of donors
- GO:0033539 ! fatty acid beta-oxidation using acyl-CoA dehydrogenase
- GO:0050660 ! flavin adenine dinucleotide binding
- GO:0055114 ! oxidation-reduction process
- TMHMM Prediction
- Proteins
