dmsA:Gene Product(s)
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Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Standard name |
DmsA |
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Synonyms |
dimethyl sulfoxide reductase, anaerobic, subunit A[1], B0894[2][1], DmsA[2][1] , ECK0885, JW5118, b0894 |
Product description |
dimethyl sulfoxide reductase, chain A[2][3]; Component of dimethyl sulfoxide reductase[2][3] DMSO reductase subunit A, anaerobic, periplasmic[4] |
EC number (for enzymes) | |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
---|---|---|---|---|---|---|---|---|
GO:0030288 |
outer membrane-bounded periplasmic space |
C |
Seeded from Riley et al 2006 [1]. |
Missing: evidence, reference | ||||
GO:0005506 |
iron ion binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0005506 |
iron ion binding |
IMP: Inferred from Mutant Phenotype |
F |
Seeded from EcoCyc (v14.0) |
complete | |||
GO:0005886 |
plasma membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0006810 |
transport |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
SP_KW:3062312 |
P |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0009055 |
electron carrier activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0009055 |
electron carrier activity |
IMP: Inferred from Mutant Phenotype |
F |
Seeded from EcoCyc (v14.0) |
complete | |||
GO:0009061 |
anaerobic respiration |
IEP: Inferred from Expression Pattern |
P |
Seeded from EcoCyc (v14.0) |
complete | |||
GO:0009389 |
dimethyl sulfoxide reductase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0009390 |
dimethyl sulfoxide reductase complex |
IDA: Inferred from Direct Assay |
C |
Seeded from EcoCyc (v14.0) |
complete | |||
GO:0016020 |
membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0016491 |
oxidoreductase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0016491 |
oxidoreductase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0016491 |
oxidoreductase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0016491 |
oxidoreductase activity |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0016491 |
oxidoreductase activity |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0030151 |
molybdenum ion binding |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0030151 |
molybdenum ion binding |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0030151 |
molybdenum ion binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0030151 |
molybdenum ion binding |
IMP: Inferred from Mutant Phenotype |
F |
Seeded from EcoCyc (v14.0) |
complete | |||
GO:0051539 |
4 iron, 4 sulfur cluster binding |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0051539 |
4 iron, 4 sulfur cluster binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0051539 |
4 iron, 4 sulfur cluster binding |
IMP: Inferred from Mutant Phenotype |
F |
Seeded from EcoCyc (v14.0) |
complete | |||
GO:0055114 |
oxidation reduction |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0055114 |
oxidation reduction |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Partner Type | Partner | Notes | References | Evidence |
---|---|---|---|---|
Protein |
Subunits of dimethyl sulfoxide reductase |
could be indirect |
| |
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Compartment | Description | Evidence | Reference/Source | Notes |
---|---|---|---|---|
cytoplasm |
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Periplasm |
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Name | |
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Sequence |
MASSALTLPF SRIAHAVDSA IPTKSDEKVI WSACTVNCGS RCPLRMHVVD GEIKYVETDN TGDDNYDGLH QVRACLRGRS MRRRVYNPDR LKYPMKRVGA RGEGKFERIS WEEAYDIIAT NMQRLIKEYG NESIYLNYGT GTLGGTMTRS WPPGNTLVAR LMNCCGGYLN HYGDYSSAQI AEGLNYTYGG WADGNSPSDI ENSKLVVLFG NNPGETRMSG GGVTYYLEQA RQKSNARMII IDPRYTDTGA GREDEWIPIR PGTDAALVNG LAYVMITENL VDQAFLDKYC VGYDEKTLPA SAPKNGHYKA YILGEGPDGV AKTPEWASQI TGVPADKIIK LAREIGSTKP AFISQGWGPQ RHANGEIATR AISMLAILTG NVGINGGNSG AREGSYSLPF VRMPTLENPI QTSISMFMWT DAIERGPEMT ALRDGVRGKD KLDVPIKMIW NYAGNCLINQ HSEINRTHEI LQDDKKCELI VVIDCHMTSS AKYADILLPD CTASEQMDFA LDASCGNMSY VIFNDQVIKP RFECKTIYEM TSELAKRLGV EQQFTEGRTQ EEWMRHLYAQ SREAIPELPT FEEFRKQGIF KKRDPQGHHV AYKAFREDPQ ANPLTTPSGK IEIYSQALAD IAATWELPEG DVIDPLPIYT PGFESYQDPL NKQYPLQLTG FHYKSRVHST YGNVDVLKAA CRQEMWINPL DAQKRGIHNG DKVRIFNDRG EVHIEAKVTP RMMPGVVALG EGAWYDPDAK RVDKGGCINV LTTQRPSPLA KGNPSHTNLV QVEKV |
Length |
785 |
Mol. Wt |
87.45 kDa |
pI |
6.6 (calculated) |
Extinction coefficient |
123,650 - 125,525 (calc based on 35 Y, 13 W, and 15 C residues) |
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Domains/Motifs/Modification Sites
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Resource type | Source | Notes/Reference |
---|---|---|
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
Name | URL | Comments |
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 5.2 Rothery, RA & Weiner, JH (1991) Alteration of the iron-sulfur cluster composition of Escherichia coli dimethyl sulfoxide reductase by site-directed mutagenesis. Biochemistry 30 8296-305 PubMed
- ↑ Trieber, CA et al. (1994) Multiple pathways of electron transfer in dimethyl sulfoxide reductase of Escherichia coli. J. Biol. Chem. 269 7103-9 PubMed
- ↑ Cotter, PA & Gunsalus, RP (1989) Oxygen, nitrate, and molybdenum regulation of dmsABC gene expression in Escherichia coli. J. Bacteriol. 171 3817-23 PubMed
- ↑ Weiner, JH et al. (1988) Purification and properties of Escherichia coli dimethyl sulfoxide reductase, an iron-sulfur molybdoenzyme with broad substrate specificity. J. Bacteriol. 170 1505-10 PubMed
- ↑ Bilous, PT et al. (1988) Nucleotide sequence of the dmsABC operon encoding the anaerobic dimethylsulphoxide reductase of Escherichia coli. Mol. Microbiol. 2 785-95 PubMed
- ↑ 10.0 10.1 10.2 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
Categories
- GO:0030288 ! outer membrane-bounded periplasmic space
- GO:0005506 ! iron ion binding
- GO:0005886 ! plasma membrane
- GO:0006810 ! transport
- GO:0009055 ! electron transfer activity
- GO:0009061 ! anaerobic respiration
- GO:0009389 ! dimethyl sulfoxide reductase activity
- GO:0009390 ! dimethyl sulfoxide reductase complex
- GO:0016020 ! membrane
- GO:0016491 ! oxidoreductase activity
- GO:0030151 ! molybdenum ion binding
- GO:0051539 ! 4 iron, 4 sulfur cluster binding
- GO:0055114 ! oxidation-reduction process
- Proteins