djlC:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

DjlC

Synonyms

Hsc56 co-chaperone of HscC[1], HscD[2][1], DjlC[2][1], YbeV[2][1], B0649[2][1], Hsc56[2][1] , ECK0642, hscD, JW0644, ybeV, b0649

Product description

Hsc56, co-chaperone of Hsc62[2][3]

Hsc56, DnaJ-like co-chaperone of HscC; stimulates the ATPase activity of HscC(Hsc62), which binds to and inhibits RpoD[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

lon

PMID:16606699[5]

Experiment(s):EBI-1137555

Protein

groL

PMID:16606699[5]

Experiment(s):EBI-1137555
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MKTCWQILEI ESTTQIDIIR QAYLARLPLC HPETDPQGFK ALRQAYEEAL RLAVNPVEEA
DDEEKDAAAE HEILRAFRTL LDSESDRFQP SAWQKFIQQL NTWNMEDVDQ LRWPLCAIAI
EARYLSLNCA SLLAERLNWH SFNDSEGMDE EEREAFLEAI QAGDCFDFLS LLEYPIALQN
QTVEYYFALE RCCRYHPDYV TAFLAMEGPW LIPDDAKLHR KLLRWYSSVQ TGMAELIPVA
QQWQTEEPES EDARYYLCAQ RLYCGEGESL LADLCAYWES YPSTQADNLL LQWSKRHCPD
YFALLVMVIE ARSMVDAQGQ PLKYVPGESA RTRLLWAEIL HSGKLSPLGQ SFIESLFFKR
KAWAWWKSRV GSETEQDSPF LDLYRVAEQV VLEAFPKQEM LARLNTRLEG GDAHPLEAIV
TRMLLTKVKL EPEDEDVDEP TPENHEEKND EGEKPQSITS IIKISLTVLV IGYALGKIAM LFS
Length

483

Mol. Wt

55.683 kDa

pI

4.5 (calculated)

Extinction coefficient

103,820 - 105,195 (calc based on 18 Y, 14 W, and 11 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=djlC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128632

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945253

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002222

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P77359

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G6356

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13652

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945253

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002963

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3416

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed

Categories

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