dipZ:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT5G54290 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

DSBD

From SHIGELLACYC, found in beta and gamma proteobacteria

E. coli O157

DSBD

From ECOO157CYC

Caulobacter crescentus, Salmonella typhimurium

ScsB

PMID:15380548[1] PMID:9260936[2]

eubacteria, archaea, plant (studied well in Rhodobacter capsulatus)

CcdA

PMID:12145197[3]: homologs of transmembrane domain of DsbD: most of them contain only 6 transmembrane segments


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02683 Cytochrome C biogenesis protein transmembrane region

Superfamily (EcoliWiki Page)

SUPERFAMILY:52833

Panther (EcoliWiki Page)

PTHR10438:SF20

Superfamily (EcoliWiki Page)

SUPERFAMILY:74863

Pfam (EcoliWiki Page)

PF00085 Thioredoxin

Pfam (EcoliWiki Page)

PF11412 Disulphide bond corrector protein DsbC

EcoCyc

EcoCyc:EG12178

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12178

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002071

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2095

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013539

Escherichia coli str. K-12 substr. MG1655

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. Porat, A et al. (2004) The unusual transmembrane electron transporter DsbD and its homologues: a bacterial family of disulfide reductases. Res. Microbiol. 155 617-22 PubMed
  2. Gupta, SD et al. (1997) A Salmonella typhimurium genetic locus which confers copper tolerance on copper-sensitive mutants of Escherichia coli. J. Bacteriol. 179 4977-84 PubMed
  3. Katzen, F et al. (2002) Evolutionary domain fusion expanded the substrate specificity of the transmembrane electron transporter DsbD. EMBO J. 21 3960-9 PubMed

Categories

[back to top]