bcsG:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

BcsG

Synonyms

predicted inner membrane protein[1], B3538[2][1], BcsG[2][1], YhjU[2][1] , ECK3523, JW3506, yhjU, b3538

Product description

predicted inner membrane protein[2][3]

Putative endoglucanase in operon required for cellulose production in Salmonella; endohydrolysis of 1,4-beta-D-glucosidic linkages in cellulose[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

infB

PMID:19402753[5]

LCMS(ID Probability):99.4

Protein

rplW

PMID:19402753[5]

LCMS(ID Probability):99.6

Protein

rplI

PMID:19402753[5]

LCMS(ID Probability):99.6

Protein

rplL

PMID:19402753[5]

LCMS(ID Probability):99.6

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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MTQFTQNTAM PSSLWQYWRG LSGWNFYFLV KFGLLWAGYL NFHPLLNLVF AAFLLMPLPR
YSLHRLRHWI ALPIGFALFW HDTWLPGPES IMSQGSQVAG FSTDYLIDLV TRFINWQMIG
AIFVLLVAWL FLSQWIRITV FVVAILLWLN VLTLAGPSFS LWPAGQPTTT VTTTGGNAAA
TVAATGGAPV VGDMPAQTAP PTTANLNAWL NNFYNAEAKR KSTFPSSLPA DAQPFELLVI
NICSLSWSDI EAAGLMSHPL WSHFDIEFKN FNSATSYSGP AAIRLLRASC GQTSHTNLYQ
PANNDCYLFD NLSKLGFTQH LMMGHNGQFG GFLKEVRENG GMQSELMDQT NLPVILLGFD
GSPVYDDTAV LNRWLDVTEK DKNSRSATFY NTLPLHDGNH YPGVSKTADY KARAQKFFDE
LDAFFTELEK SGRKVMVVVV PEHGGALKGD RMQVSGLRDI PSPSITDVPV GVKFFGMKAP
HQGAPIVIEQ PSSFLAISDL VVRVLDGKIF TEDNVDWKKL TSGLPQTAPV SENSNAVVIQ
YQDKPYVRLN GGDWVPYPQ
Length

559

Mol. Wt

62.032 kDa

pI

6.6 (calculated)

Extinction coefficient

122,840 - 123,215 (calc based on 16 Y, 18 W, and 3 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

23..554

PF11658 Protein of unknown function (DUF3260)

PMID:19920124[6]

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tmhmm.php?gene=bcsG&show=pic&.jpg
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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=bcsG taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131410

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948058

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011558

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P37659

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG12265

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12265

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948058

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002146

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2174

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
  6. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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