bcsE:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

BcsE

Synonyms

conserved protein[1], B3536[2][1], BcsE[2][1], YhjS[2][1] , ECK3521, JW3504, yhjS, b3536

Product description

conserved protein[2][3]

Required for cellulose production in Salmonella[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
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Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

ycaO

PMID:16606699[5]

Experiment(s):EBI-1146090

Protein

bglX

PMID:16606699[5]

Experiment(s):EBI-1146090
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MRDIVDPVFS IGISSLWDEL RHMPAGGVWW FNVDRHEDAI SLANQTIASQ AETAHVAVIS
MDSDPAKIFQ LDDSQGPEKI KLFSMLNHEK GLYYLTRDLQ CSIDPHNYLF ILVCANNAWQ
NIPAERLRSW LDKMNKWSRL NHCSLLVINP GNNNDKQFSL LLEEYRSLFG LASLRFQGDQ
HLLDIAFWCN EKGVSARQQL SVQQQNGIWT LVQSEEAEIQ PRSDEKRILS NVAVLEGAPP
LSEHWQLFNN NEVLFNEART AQAATVVFSL QQNAQIEPLA RSIHTLRRQR GSAMKILVRE
NTASLRATDE RLLLACGANM VIPWNAPLSR CLTMIESVQG QKFSRYVPED ITTLLSMTQP
LKLRGFQKWD VFCNAVNNMM NNPLLPAHGK GVLVALRPVP GIRVEQALTL CRPNRTGDIM
TIGGNRLVLF LSFCRINDLD TALNHIFPLP TGDIFSNRMV WFEDDQISAE LVQMRLLAPE
QWGMPLPLTQ SSKPVINAEH DGRHWRRIPE PMRLLDDAVE RSS
Length

523

Mol. Wt

59.428 kDa

pI

6.6 (calculated)

Extinction coefficient

84,450 - 85,575 (calc based on 5 Y, 14 W, and 9 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

162..474

PF10995 Protein of unknown function (DUF2819)

PMID:19920124[6]

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Structure
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Structures

<beststructure> gene=bcsE taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131408

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948050

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011554

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P37657

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG12263

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12263

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948050

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002144

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2172

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  6. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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