aslB:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

AslB

Synonyms

predicted regulator of arylsulfatase activity[1], B3800[2][1], GppB[2][1], AtsB[2][1], AslB[2][1] , atsB, ECK3793, gppB, JW5594, b3800

Product description

putative arylsulfatase[2]; predicted anaerobic sulfatase maturation enzyme[3]

Suppresses gpp mutants, putative arylsulfatase[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007197

F

Seeded from EcoCyc (v14.0)

complete

GO:0005506

iron ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0408

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007197

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0411

F

Seeded from EcoCyc (v14.0)

complete

GO:0051539

4 iron, 4 sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0004

F

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MLQQVPTRAF HVMAKPSGSD CNLNCDYCFY LEKQSLYREK PVTHMDDDTL EAYVRHYIAA
SEPQNEVAFT WQGGEPTLLG LAFYRRAVAL QAKYGAGRKI SNSFQTNGVL LDDEWCAFLA
EHHFLVGLSL DGPPEIHNQY RVTKGGRPTH KLVMRALTLL QKHHVDYNVL VCVNRTSAQQ
PLQVYDFLCD AGVEFIQFIP VVERLADETT ARDGLKLHAP GDIQGELTEW SVRPEEFGEF
LVAIFDHWIK RDVGKIFVMN IEWAFANFVG APGAVCHHQP TCGRSVIVEH NGDVYACDHY
VYPQYRLGNM HQQTIAEMID SPQQQAFGED KFKQLPAQCR SCNVLKACWG GCPKHRFMLD
ASGKPGLNYL CAGYQRYFRH LPPYLKAMAD LLAHGRPASD IMHAHLLVVS K
Length

411

Mol. Wt

46.512 kDa

pI

7.0 (calculated)

Extinction coefficient

59,820 - 61,570 (calc based on 18 Y, 6 W, and 14 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

16..207

PF04055 Radical SAM superfamily

PMID:19920124[5]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=aslB taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:49176415

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:949013

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012408

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P25550

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10090

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10090

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:949013

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000086

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0088

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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