aegA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

AegA

Synonyms

fused predicted oxidoreductase: FeS binding subunit[1], NAD/FAD-binding subunit[1], B2468[2][1], AegA[2][1], YffG[2][1] , ECK2463, JW2452, yffG, b2468

Product description

putative oxidoreductase, Fe-S subunit[2][3]

Putative oxidoreductase, Fe-S subunit; induced by anaerobiosis, repressed by NO3; ygfT paralog[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005506

iron ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0408

F

Seeded from EcoCyc (v14.0)

complete

GO:0006537

glutamate biosynthetic process

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006006

P

Seeded from EcoCyc (v14.0)

complete

GO:0009055

electron carrier activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001450

F

Seeded from EcoCyc (v14.0)

complete

GO:0009055

electron carrier activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR017900

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012285

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

F

Seeded from EcoCyc (v14.0)

complete

GO:0016639

oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006006

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001450

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012285

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR017900

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0411

F

Seeded from EcoCyc (v14.0)

complete

GO:0051539

4 iron, 4 sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0004

F

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

P

Seeded from EcoCyc (v14.0)

complete

GO:0003674

molecular function

127.0.0.1 14:51, 17 February 2015 (CST)

ND: No biological Data available

F

Cannot find sources other than PMID:8955321[5], which gives some idea of F via comparison to unannotated or non- E coli genes.

Missing: reference

GO:0005575

cellular component

127.0.0.1 14:51, 17 February 2015 (CST)

ND: No biological Data available

C

Cannot find sources other than PMID:8955321[5], which gives some idea of F via comparison to unannotated or non- E coli genes.

Missing: reference

GO:0009987

cellular process

127.0.0.1 14:51, 17 February 2015 (CST)

ND: No biological Data available

P

Cannot find sources other than PMID:8955321[5], which gives some idea of F via comparison to unannotated or non- E coli genes.

Missing: reference

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MNRFIMANSQ QCLGCHACEI ACVMAHNDEQ HVLSQHHFHP RITVIKHQQQ RSAVTCHHCE
DAPCARSCPN GAISHVDDSI QVNQQKCIGC KSCVVACPFG TMQIVLTPVA AGKVKATAHK
CDLCAGRENG PACVENCPAD ALQLVTDVAL SGMAKSRRLR TARQEHQPWH ASTAAQEMPV
MSKVEQMQAT PARGEPDKLA IEARKTGFDE IYLPFRADQA QREASRCLKC GEHSVCEWTC
PLHNHIPQWI ELVKAGNIDA AVELSHQTNT LPEITGRVCP QDRLCEGACT IRDEHGAVTI
GNIERYISDQ ALAKGWRPDL SHVTKVDKRV AIIGAGPAGL ACADVLTRNG VGVTVYDRHP
EIGGLLTFGI PSFKLDKSLL ARRREIFSAM GIHFELNCEV GKDVSLDSLL EQYDAVFVGV
GTYRSMKAGL PNEDAPGVYD ALPFLIANTK QVMGLEELPE EPFINTAGLN VVVLGGGDTA
MDCVRTALRH GASNVTCAYR RDEANMPGSK KEVKNAREEG ANFEFNVQPV ALELNEQGHV
CGIRFLRTRL GEPDAQGRRR PVPVEGSEFV MPADAVIMAF GFNPHGMPWL ESHGVTVDKW
GRIIADVESQ YRYQTTNPKI FAGGDAVRGA DLVVTAMAEG RHAAQGIIDW LGVKSVKSH
Length

659

Mol. Wt

71.841 kDa

pI

6.7 (calculated)

Extinction coefficient

51,910 - 55,410 (calc based on 9 Y, 7 W, and 28 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

80..103

PF00037 4Fe-4S binding domain

PMID:19920124[6]

Domain

329..631

PF07992 Pyridine nucleotide-disulphide oxidoreductase

PMID:19920124[6]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=aegA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16130393

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947383

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008127

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P37127

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG12409

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12409

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947383

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002270

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2308

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 Cavicchioli, R et al. (1996) Characterization of the aegA locus of Escherichia coli: control of gene expression in response to anaerobiosis and nitrate. J. Bacteriol. 178 6968-74 PubMed
  6. ↑ 6.0 6.1 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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