Plasmid F ychA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

ychA

Synonyms

ychA, Fpla030

Product description

ychA

similar to Adhesin AidA-I precursors, ice nucleaation proteins, surface proteins, and outer membrane proteins; similar to ychB

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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</protect>


Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MNCQRYFCFV NGIVEIRTAP EEYQNKPVLV GSQSDGLLII DNHADIEDGI FSTLHIGNGY
NGAVDVINGA ALHMDNRSGS APLIVGAFGN DIAGKLNISG RNSIVSYRDT PSSSGHNESI
YVGFGPGATG WINIFNGGVF EVLNSTNIYV GSDTPGGGDG SIVIDGSNSK MTADFSEAYV
GLYGNGDISL KNGGQLSASN LYIGGNGRAI VNISGTDSRL IANMITISGS SGAPGIYIAD
QGILNVDNYI NITTANDTKG KLFINSDMPG TIESKGILFG VGKAELIFKH NSDNYAFSSP
LISKNTGNGI INAESGETHL TGDNTDYSGL LNILPTASID ISSQKNIGKS VIVNNGVLQI
TSQDDWTFNN NMTGNGYLNV HTGGHNFAFQ NSTNTQEFTG TLALSDTLFD LSDDNTTALT
SALVLAGVGS VITAGTGTQV INGFSFDGGA VNFGAVTQGA QQTESQIQVT DNLYINGNGA
VRVSTPTDVN GIPQVINSSL SLLEQDDSNA TIKLVDASSA VVKGNGGNLQ LQDASGQVIS
SGKQRNIVQQ GKNVAKGVYD YRLTSGPHND GLYIGYALTQ LDLLASGVDA LVLDAAGTTG
NAADMSARIT GAGDLAFNSQ KGETVSLSNQ DNDYTGVTAI RGGNVLMNSN SVLGQTSEIR
LATDTRLDMN GHSQTVGKLN GAAGSVLNIN GGNLTLTDDG VSAGTLTGGG FLNISGGVLD
ITGGNHTFAV STIIAKDATV RMNDVSGLGT GNISNAGTLS LTHASGLLSN NLSGSGTVSL
INSDTQISGN NSNYSGLFVV DTSSQLTATG AQNLGIASVS NRGILQLNNT TDWQLINNVT
GTGNVRKTGS GSLTVRSNAA WSGQTDIDDG SLILGQSDAP VMLASSLVNI AKNGKLTGFG
GVVGNVTNSG SLDLRSAAPG NILTIGGNYT GNNGTLLINT VLDDSSSATD KLVIKGDASG
KTRVAVTNVG GSGANTLNSI EVIHVDGNAA NAEFIQAGRI AAGAYDYTLG RGPGSNYGNW
YLSSSKNTPE PRPDPEPTPE GHDNNLRPEA SSYTANIAAA NTMFVTRLHE RLGQTQYVDA
ITGEPKATSM WMRHEGGHNR WRDGSGQLKT QSNRYVIQLG GDIAQWDWGG TNRWHLGVMA
GYGNNHSSTG AVRTGYHSKG SVNGYSTGLY ATWYADDETH NGAYLDTWAQ YGWFDNHVKG
DGLPGESWKS KGLTASLETG YAWKIGEFSS NYGNLNEWYV QPQAQLVWMG VKADELYESN
GTLIESTGDG NVHTRLGVKT WIKRLNKMDD GKSREFSPFV EVNWLHNTRD FGVRMNGEPV
YQDGTRNIGE VKTGVEGQIN PHLNLWGNVR VQVGDKGYND TSAMLGVKYT F
Length

1,371

Mol. Wt

143.693 kDa

pI

4.9 (calculated)

Extinction coefficient

174,070 - 174,320 (calc based on 43 Y, 20 W, and 2 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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<motif_map/>

Structure
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Structures

<beststructure> gene=Plasmid_F_ychA taxon=2465 </beststructure>

Models

View models at:

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</protect>

Structure figures

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</protect>

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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