Plasmid F traK:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

traK

Synonyms

traK, Fpla079

Product description

traK

required for F pilus assembly; periplasmic protein

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005515

protein binding

PMID:11722740[1]

IPI: Inferred from Physical Interaction

EcoliWiki:Plasmid_F_traK


F

complete

GO:0005515

protein binding

PMID:11722740[1]

IPI: Inferred from Physical Interaction

EcoliWiki:Plasmid_F_traV


F

complete

GO:0030288

outer membrane-bounded periplasmic space

PMID:11722740[1]

IDA: Inferred from Direct Assay

C

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MRKNNTAIIF GSLFFSCSVM AANGTLAPTV VPMVNGGQAS IAISNTSPNL FTVPGDRIIA
VNSLDGALTN NEQTASGGVV VATVNKKPFT FILETERGLN LSIQAVPREG AGRTIQLVSD
LRGTGEEAGA WETSTPYESL LVTISQAVRG GKLPAGWYQV PVTKETLQAP AGLSSVADAV
WTGNHLKMVR FAVENKTLSA LNIRESDFWQ PGTRAVMFSQ PASQLLAGAR MDVYVIRDGE GN
Length

242

Mol. Wt

25.626 kDa

pI

7.1 (calculated)

Extinction coefficient

26,470 - 26,595 (calc based on 3 Y, 4 W, and 1 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

motif

1-16

UniProt Manual:Signal Peptides

UniProt:P41066


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<motif_map/>

Structure
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Structures

<beststructure> gene=Plasmid_F_traK taxon=2465 </beststructure>

Models

View models at:

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</protect>

Structure figures

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</protect>

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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  1. ↑ 1.0 1.1 1.2 Harris, RL et al. (2001) Evidence that F-plasmid proteins TraV, TraK and TraB assemble into an envelope-spanning structure in Escherichia coli. Mol. Microbiol. 42 757-66 PubMed

Categories

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