Plasmid F srnB':Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
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| Standard name |
srnB' |
|---|---|
| Synonyms |
srnB', Fpla006 |
| Product description |
srnB' similar to FlmA; stable RNA degradation B'; stable RNA negative protein; kills the host cell by destabilizing polar membranes unless the antidote antisense regulator srnC is produced to turn off expression of srnB; srnB mRNA is stable and persists in cells that have lost the F plasmid resulting in death of plasmid-free bacterial cells; may also inhibit competitor plasmids |
| EC number (for enzymes) |
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| edit table |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| edit table |
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MTKYALIGLL AVCATVLCFS LIFRERLCEL NIHRGNTVVQ VTLAYEARK |
| Length |
49 |
| Mol. Wt |
5.542 kDa |
| pI |
8.9 (calculated) |
| Extinction coefficient |
2,980 - 3,355 (calc based on 2 Y, 0 W, and 3 C residues) |
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Domains/Motifs/Modification Sites
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<motif_map/> |
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
EcoCyc: |
Escherichia coli str. K-12 substr. MG1655 | |
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EcoGene: |
Escherichia coli str. K-12 substr. MG1655 | |
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RegulonDB: |
Escherichia coli str. K-12 substr. MG1655 | |
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EchoBASE: |
Escherichia coli str. K-12 substr. MG1655 | |
|
ASAP: |
Escherichia coli str. K-12 substr. MG1655 | |
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
References
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