Phage lambda V:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

V

Synonyms

V, lambdap13

Product description

tail component: major tail protein [1]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0098019

virus tail, major subunit

PMID:4923012[2]

IDA: Inferred from Direct Assay

C

complete

GO:0098019

virus tail, major subunit

PMID:6456359[3]

IMP: Inferred from Mutant Phenotype

C

complete

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

</protect>


Notes

Localization

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Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MPVPNPTMPV KGAGTTLWVY KGSGDPYANP LSDVDWSRLA KVKDLTPGEL TAESYDDSYL
DDEDADWTAT GQGQKSAGDT SFTLAWMPGE QGQQALLAWF NEGDTRAYKI RFPNGTVDVF
RGWVSSIGKA VTAKEVITRT VKVTNVGRPS MAEDRSTVTA ATGMTVTPAS TSVVKGQSTT
LTVAFQPEGV TDKSFRAVSA DKTKATVSVS GMTITVNGVA AGKVNIPVVS GNGEFAAVAE
ITVTAS
Length

246

Mol. Wt

25.808 kDa

pI

4.8 (calculated)

Extinction coefficient

40,450 (calc based on 5 Y, 6 W, and 0 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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<motif_map/>

Structure
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Structures

<beststructure> gene=Phage_lambda_V taxon=10710 </beststructure>

Models

View models at:

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</protect>

Structure figures

See Help:Jmol in EcoliWiki

Solution Structure of gpV, Major Tail Protein
<jmol> <jmolApplet> <color>white</color> <uploadedFileContents >2K4Q.pdb</uploadedFileContents> <name></name> <script> wireframe off; spacefill off; trace off; rotate ON; cartoon; color chain; </script> </jmolApplet> </jmol>
<jmol> <jmolCheckbox > <scriptWhenChecked > rotate on; </scriptWhenChecked > <scriptWhenUnchecked > rotate off; </scriptWhenUnchecked > <checked>true</checked> <text>rotate</text> </jmolCheckbox > <jmolButton><script>reset; </script><text>reset</text></jmolButton> </jmol>









<protect>

</protect>

Notes

Image based on solution NMR; see Pell et al.

Gene Product Resources

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Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

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Notes

Links

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References

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  1. Edited by Roger W. Hendrix, Jeffrey W. Roberts, Franklin W. Stahl and Robert A. Weisberg (1983) Lambda II (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY)
  2. Buchwald, M et al. (1970) The morphogenesis of bacteriophage lambda. II. Identification of the principal structural proteins. Virology 42 390-400 PubMed
  3. Katsura, I (1981) Structure and function of the major tail protein of bacteriophage lambda. Mutants having small major tail protein molecules in their virion. J. Mol. Biol. 146 493-512 PubMed

Categories

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