Phage lambda I:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

I

Synonyms

I, lambdap20

Product description

tail component

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0098015

virus tail

PMID:18621349[1]

IMP: Inferred from Mutant Phenotype

C

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MAATHTLPLA SPGMARICLY GDLQRFGRRI DLRVKTGAEA IRALATQLPA FRQKLSDGWY
QVRIAGRDVS TSGLTAQLHE TLPDGAVIHI VPRVAGAKSG GVFQIVLGAA AIAGSFFTAG
ATLAAWGAAI GAGGMTGILF SLGASMVLGG VAQMLAPKAR TPRIQTTDNG KQNTYFSSLD
NMVAQGNVLP VLYGEMRVGS RVVSQEISTA DEGDGGQVVV IGR
Length

223

Mol. Wt

23.123 kDa

pI

10.4 (calculated)

Extinction coefficient

16,960 - 17,085 (calc based on 4 Y, 2 W, and 1 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

102 - 124

Predicted membrane-spanning helix.

TMD predicted by TMHMM[2]

Domain

129 - 151

Predicted membrane-spanning helix.

TMD predicted by TMHMM[2]


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<motif_map/>

tmhmm.php?gene=Phage_lambda_I&show=pic&.jpg
Click the image to view raw output from TMHMM.

Structure
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Structures

<beststructure> gene=Phage_lambda_I taxon=10710 </beststructure>

Models

View models at:

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</protect>

Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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Name URL Comments
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References

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  1. ↑ Kühl, PW & Katsura, I (1975) Morphogenesis of the tail of bacteriophage lambda I. In vitro intratail complementation. Virology 63 221-37 PubMed
  2. ↑ 2.0 2.1 Krogh, A et al. (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305 567-80 PubMed

Categories

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