Phage f1 VI:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
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| Standard name |
Head virion protein G6P [1] |
|---|---|
| Synonyms |
VI, protein VI [2], unnamed protein product [3], protein D [4], coat protein D [1], G6P[1] |
| Product description |
stability; located at end of phage that is extruded last [5] |
| EC number (for enzymes) |
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Notes
Function
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Gene Ontology
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| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005887 |
integral to plasma membrane |
IDA: Inferred from Direct Assay |
C |
complete | ||||
| GO:0019028 |
viral capsid |
IDA: Inferred from Direct Assay |
C |
complete | ||||
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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
G6P is stabilized by G3P |
Figure 2B shows the amount of pVI depends on the amount of pIII supplied; pVI is nearly absent without pIII. | ||
|
Protein |
Association likely exists prior to assembly |
IPI by co-precipitation; see Figure 9B, lane 8. | ||
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Notes
Localization
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| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
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Notes
Structure and Physical Properties
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Physical Properties
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| Name | |
|---|---|
| Sequence |
MPVLLGIPLL LRFLGFLLVT LFGYLLTFLK KGFGKIAIAI SLFLALIIGL NSILVGYLSD ISAQLPSDFV QGVQLILPSN ALPCFYVILS VKAAIFIFDV KQKIVSYLDW DK |
| Length |
112 |
| Mol. Wt |
12.35 kDa |
| pI |
9.5 (calculated) |
| Extinction coefficient |
11,460 - 11,585 (calc based on 4 Y, 1 W, and 1 C residues) |
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Domains/Motifs/Modification Sites
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Structure <protect> See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
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| Resource type | Source | Notes/Reference |
|---|---|---|
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Notes
Accessions in Other Databases
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| Database | Accession | Notes |
|---|---|---|
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Notes
Links
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| Name | URL | Comments |
|---|---|---|
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References
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- ↑ 1.0 1.1 1.2 UniProt:P69531 (G6P_BPF1) http://www.uniprot.org/uniprot/P69531 Cite error: Invalid
<ref>tag; name "uniprot:P69531" defined multiple times with different content - ↑ NCBI: Bacteriophage f1, complete genome http://www.ncbi.nlm.nih.gov/nuccore/J02448
- ↑ NCBI: Genome of bacteriophage f1 (closely related to phages fd and m13) http://www.ncbi.nlm.nih.gov/nuccore/V00606.1
- ↑ 4.0 4.1 Lin, TC et al. (1980) Isolation and characterization of the C and D proteins coded by gene IX and gene VI in the filamentous bacteriophage fl and fd. J. Biol. Chem. 255 10331-7 PubMed
- ↑ Marvin, DA (1998) Filamentous phage structure, infection and assembly. Curr. Opin. Struct. Biol. 8 150-8 PubMed
- ↑ 6.0 6.1 Endemann, H & Model, P (1995) Location of filamentous phage minor coat proteins in phage and in infected cells. J. Mol. Biol. 250 496-506 PubMed
- ↑ Rakonjac, J & Model, P (1998) Roles of pIII in filamentous phage assembly. J. Mol. Biol. 282 25-41 PubMed
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