Phage T7 1.4:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

1.4

Synonyms
Product description
EC number (for enzymes)



Notes

Function

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Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status


Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence


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Notes

Localization

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Compartment Description Evidence Reference/Source Notes



Notes

Structure and Physical Properties

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Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MFKKVGKFLA ALAAILTLAY ILAVYPQVAL VVVGACYLAA VCACVWSIVN W
Length

51

Mol. Wt

5.446 kDa

pI

8.9 (calculated)

Extinction coefficient

15,470 - 15,845 (calc based on 3 Y, 2 W, and 3 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

5 - 24

Predicted membrane-spanning helix.

TMD predicted by TMHMM[1]

Domain

28 - 50

Predicted membrane-spanning helix.

TMD predicted by TMHMM[1]


<motif_map/>

tmhmm.php?gene=Phage_T7_1.4&show=pic&.jpg
Click the image to view raw output from TMHMM.

Structure

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=Phage_T7_1.4 taxon=10760 </beststructure>

Models

View models at:


</protect>

Structure figures

Notes

Gene Product Resources


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Resource type Source Notes/Reference


Notes

Accessions in Other Databases


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes


Notes

Links





References


See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 Krogh, A et al. (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305 567-80 PubMed

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