Phage T5 pol:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

DNA polymerase

Synonyms
Product description

core DNA polymerase of replisome, 3'-5' exonuclease; catalyzes strand displacement when using a nick as a primer terminus; matches to InterPro family IPR001098 and InterPro domain IPR002562; experimental evidence, no additional details recorded

EC number (for enzymes)



Notes

Function

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Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status


Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

</protect>

Notes

Localization

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Compartment Description Evidence Reference/Source Notes


Notes

Structure and Physical Properties

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Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MKIAVVDKAL NNTRYDKHFQ LYGEEVDVFH MCNEKLSGRL LKKHITIGTP ENPFDPNDYD
FVILVGAEPF LYFAGKKGIG DYTGKRVEYN GYANWIASIS PAQLHFKPEM KPVFDATVEN
IHDIINGREK IAKAGDYRPI TDPDEAEEYI KMVYNMVIGP VAFDSETSAL YCRDGYLLGV
SISHQEYQGV YIDSDCLTEV AVYYLQKILD SENHTIVFHN LKFDMHFYKY HLGLTFDKAH
KERRLHDTML QHYVLDERRG THGLKSLAMK YTDMGDYDFE LDKFKDDYCK AHKIKKEDFT
YDLIPFDIMW PYAAKDTDAT IRLHNFFLPK IEKNEKLCSL YYDVLMPGCV FLQRVEDRGV
PISIDRLKEA QYQLTHNLNK AREKLYTYPE VKQLEQDQNE AFNPNSVKQL RVLLFDYVGL
TPTGKLTDTG ADSTDAEALN ELATQHPIAK TLLEIRKLTK LISTYVEKIL LSIDADGCIR
TGFHEHMTTS GRLSSSGKLN LQQLPRDESI IKGCVVAPPG YRVIAWDLTT AEVYYAAVLS
GDRNMQQVFI NMRNEPDKYP DFHSNIAHMV FKLQCEPRDV KKLFPALRQA AKAITFGILY
GSGPAKVAHS VNEALLEQAA KTGEPFVECT VADAKEYIET YFGQFPQLKR WIDKCHDQIK
NHGFIYSHFG RKRRLHNIHS EDRGVQGEEI RSGFNAIIQS ASSDSLLLGA VDADNEIISL
GLEQEMKIVM LVHDSVVAIV REDLIDQYNE ILIRNIQKDR GISIPGCPIG IDSDSEAGGS
RDYSCGKMKK QHPSIACIDD DEYTRYVKGV LLDAEFEYKK LAAMDKEHPD HSKYKDDKFI
AVCKDLDNVK RILGA
Length

855

Mol. Wt

97.592 kDa

pI

6.2 (calculated)

Extinction coefficient

89,050 - 90,925 (calc based on 45 Y, 4 W, and 15 C residues)


Domains/Motifs/Modification Sites

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Type Residues Description Notes References

<motif_map/>

Structure

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Structures

<beststructure> gene=Phage_T5_pol taxon=10726 </beststructure>

Models

View models at:

</protect>

Structure figures

Notes

Gene Product Resources


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Resource type Source Notes/Reference


Notes

Accessions in Other Databases


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes


Notes

Links



References


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