Phage T1 34:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

34

Synonyms
Product description

putative tail assembly protein similar to Yersinia pestis putative phage tail assembly protein NP_405677 and Bacteriophage N15 gp20 (NP_046915)

EC number (for enzymes)



Notes

Function

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Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status


Interactions

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Partner Type Partner Notes References Evidence


</protect>

Notes

Localization

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Compartment Description Evidence Reference/Source Notes



Notes

Structure and Physical Properties

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Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MNDVKVIKLS GSLGRRFGVF HRYAVDSYPE AIRALSSQVD GFKEYMQSEV GSRSKFAIFV
DGVNVGHHEE EKFKCAKEIR IVPIPTGSKT GGLFQVVLGA AIMVAAFYTG GASLALMGTM
SSSLFMMGGA MVLGGVMQMI SPQPGGANFE VQSSKNKPSY AFGGAVNTTA AGYPLPVPYG
YRAGGGATFS AGSYAEDMS
Length

199

Mol. Wt

20.896 kDa

pI

9.3 (calculated)

Extinction coefficient

13,410 - 13,535 (calc based on 9 Y, 0 W, and 1 C residues)


Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

96 - 118

Predicted membrane-spanning helix.

TMD predicted by TMHMM[1]


<motif_map/>

tmhmm.php?gene=Phage_T1_34&show=pic&.jpg
Click the image to view raw output from TMHMM.

Structure

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Structures

<beststructure> gene=Phage_T1_34 taxon=12355 </beststructure>

Models

View models at:


</protect>

Structure figures

Notes

Gene Product Resources


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Resource type Source Notes/Reference


Notes

Accessions in Other Databases


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes


Notes

Links





References


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  1. ↑ Krogh, A et al. (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305 567-80 PubMed

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