Phage P4 05:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

05

Synonyms
Product description

hypothetical protein; Predicted by GeneMark

EC number (for enzymes)



Notes

Function

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Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status


Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence


</protect>

Notes

Localization

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Compartment Description Evidence Reference/Source Notes



Notes

Structure and Physical Properties

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Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MSHIGRMPEV KNRMFTLHPL FTTYHSEIKG ENRKVNSVNS SFEKKFFMWI KDALVWIRAT
DPNLLIKNDL TFRFIDGLKI DWSEKQWGHK RGHISLLCFI ICFLSLTYFD V
Length

111

Mol. Wt

13.239 kDa

pI

9.8 (calculated)

Extinction coefficient

24,980 - 25,230 (calc based on 2 Y, 4 W, and 2 C residues)


Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Domain

92 - 109

Predicted membrane-spanning helix.

TMD predicted by TMHMM[1]


<motif_map/>

tmhmm.php?gene=Phage_P4_05&show=pic&.jpg
Click the image to view raw output from TMHMM.

Structure

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=Phage_P4_05 taxon=10680 </beststructure>

Models

View models at:


</protect>

Structure figures

Notes

Gene Product Resources


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Resource type Source Notes/Reference


Notes

Accessions in Other Databases


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes


Notes

Links





References


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  1. ↑ Krogh, A et al. (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305 567-80 PubMed

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