Phage P2 lysA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

lysA

Synonyms

P2p10

Product description

LysA; experimental evidence, no additional details recorded; nonessential; affects timing of lysis

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0019835

cytolysis

PMID:8051010[1]

IMP: Inferred from Mutant Phenotype

P

Table 1, figure 5B

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MKKLSLSLML NVSLALMLAL SLIYPQSVAV NFVAAWAILA TVICVVAGGV GVYATEYVLE
RYGRELPPES LAVKIVTSLF LQPVPWRRRA AALVVVVATF ISLVAAGWIF TALIYLVVSL
FFRLIRKACR QRLEGREPCQ G
Length

141

Mol. Wt

15.496 kDa

pI

10.3 (calculated)

Extinction coefficient

23,950 - 24,325 (calc based on 5 Y, 3 W, and 3 C residues)

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Domains/Motifs/Modification Sites <protect> See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

33 - 55

Predicted membrane-spanning helix.

TMD predicted by TMHMM[2]

Domain

96 - 118

Predicted membrane-spanning helix.

TMD predicted by TMHMM[2]

Domain

7 - 29

Predicted membrane-spanning helix.

TMD predicted by TMHMM[2]


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Structure
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Structures

<beststructure> gene=Phage_P2_lysA taxon=10679 </beststructure>

Models

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Structure figures

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Ziermann, R et al. (1994) Functions involved in bacteriophage P2-induced host cell lysis and identification of a new tail gene. J. Bacteriol. 176 4974-84 PubMed
  2. ↑ 2.0 2.1 2.2 Krogh, A et al. (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305 567-80 PubMed

Categories

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