Phage P1 prt:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

Prt

Synonyms

gp012

Product description

putative portal protein;

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0098005

viral head-tail joining

PMID:15489417[1]

ISA: Inferred from Sequence Alignment

UniProtKB:O36161


P

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MADNKITLSS VRKALAGVFK DNGERDNILL SALAVHGGSG YLFSRAGAPV QLSGFLGGKP
GDSGMAGDGL VDGSRFIFDE VQLPEDRLQR YPLLEEMAVY STIATALNIH ITHALSFDKK
TGQTFSIVPV HNGNDSDYDA AQALCGELMN DIGRTINKEV AGWAFIMSVF GVAYVRPYAK
EGIGITSFEC SYYTLPSFIK EFEVSGNLAG FSGDYLKDAS GKMVFADPWA IIPMKIPYWR
PKSNLMPVHT GHKAYSLLDN PEERTPIETQ NYGTSLLEYA YEPYMNLRSA IRSLKATRFN
ASKIDRIIGL AMNSLDPVKA ADYSRTITQT LKRAADLMER RARGANNMPT VTNTLLPIMG
DGKGQMTIDT QTIQADINGI EDILTYMRQL AAALGLDYTL LGWADQMSGG LGEGGFLRTA
IQAAMRASWI QQGVEEFIQR AIDIHLAFKY GKVYPEGDRP YKIEFHSVNT ALQQEHNDNR
DSQANYATIV TQILDAVSNN SVLANSDAFK RYLFSDVLEI DEKISEALVN ELKAKSEDDD
HLMDSIIKTP PQELAQILES VFKEGNDND
Length

569

Mol. Wt

62.752 kDa

pI

5.0 (calculated)

Extinction coefficient

61,770 - 62,020 (calc based on 23 Y, 5 W, and 2 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=Phage_P1_prt taxon=10678 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Łobocka, MB et al. (2004) Genome of bacteriophage P1. J. Bacteriol. 186 7032-68 PubMed

Categories

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