Phage P1 pacA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

PacA

Synonyms

gp109

Product description

P1 packase subunit; cuts phage DNA at pac site together with PacB; predicted product 100 pct identical to previously predicted product of pacA of P1 Swissprot: PACA_BPP1;

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0019073

viral DNA genome packaging

PMID:1538406[1]

IMP: Inferred from Mutant Phenotype

P

Figure 4, text on 986

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MTWDDHKKNF ARLARDGGYT IAQYAAEFNL NPNTARRYLR AFKEDTRTTD SRKPNKPVRK
PLKSMIIDHS NDQHAGDHIA AEIAEKQRVN AVVSAAVENA KRQNKRINDR SDDHDVITRA
HRTLRDRLER DTLDDDGERF EFEVGDYLID NVEARKAARA MLRRSGADVL ETTLLEKSLS
HLLMLENARD TCIRLVQEMR DQQKDDDEGT PPEYRIASML NSCSAQISSL INTIYSIRNN
YRKESREAEK HALSMGQAGI VKLAYERKRE NNWSVLEAAE FIEAHGGKVP PLMLEQIKAD
LRAPKTNTDD EENQTASGAP SLEDLDKIAR ERAASRRADA ALWIEHRREE IADIVDTGGY
GDVDAEGISN EAWLEQDLDE DEEEDEEVTR KLYGDDD
Length

397

Mol. Wt

45.279 kDa

pI

4.9 (calculated)

Extinction coefficient

36,900 - 37,150 (calc based on 10 Y, 4 W, and 2 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=Phage_P1_pacA taxon=10678 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Skorupski, K et al. (1992) Bacteriophage P1 genes involved in the recognition and cleavage of the phage packaging site (pac). J. Mol. Biol. 223 977-89 PubMed

Categories

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