Phage P1 ddrB:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

DdrB

Synonyms

gp022

Product description

unknown protein function; possible metallopeptidase; region of aa 1..690 100 pct identical with region of aa 1..690 of 715 aa long hypothetical P1 protein product of orfVI of lydA region PID:g2462945; region of aa 713..995 100 pct identical to 283 aa long hypothetical P1 protein product of orfVII of lydA region PID:g2505897;

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MSLSDQVVMA TSIETLIELL KNLPDFGRVS YVVTAKGDEV KTAFDIVDAS ALLVSNTLDG
KINPDYPQEL QPRDRTRASS LLQVNQISKD LRPAQLTDSG LSSHGAPIIG EDNAVESGNG
RTMGIIKAYQ DGNADRYREY LIDHATEFGI PPEKVESMTA PVLVRRRLTK VDRVQFAKDS
NISDLQEMAA SEKAFVDADS ITPAMMALFN PSESGDLLSR SNDAFIRGFM TQVGATQAAG
LVTEDGRPTR QLVDRIQNAI FAKAYKDARL VRMVAEEPDP DMRNVLTALN AAANDFVQMQ
ALSGEAHKQA VTTIVDGIET ADSLDKKALA ALKDAVDLVR QSKESGQHIT DVIAQGDMFS
ETAPEVKALA LFIVANNRSA KRMATAFKLM AQRINDELQH QGQALGDMFG GGDVSLQDIL
RQVSQELENE GMQGISGGLF ESVSGGSYNG VAPYTSLLLH RASGIKDIIH LIRLLSRTDP
HDEQLVQVLA HFVRMPVADV KKWCRLFGIS NSLLRGLLNH ASSLGRDGFD EIAQAIKNGD
MPPAIDWFSI RPTRVKAFLS AAHSASSLAE MVQRLSLIFT DHTALGDLTL DEMKDASIQW
ADQQNEVNSD FLTAFRKAVS KADDARGILK AFKALQSRVN KHVGDIDGVT AEGRDILKEH
GITPEFIDEI RTDMQREVVS SLQIVARALA DANPKSAAIV NRVIGDIEAS EGMGVLKLFL
SRAFNPNGNI LPGIIGEAKK YVSEEELEQL DQLLKRFSYN PQTRWQMNQR SMGSVHEKVL
SAMNSAIANS YVSEEKALEW ADSFITEEVE EVRAGQNGGI DLRKELADIY RLTGGKISTL
SKVVHHQGRA YANLNGVVAV NLNDENASAL WHELGHHLEY SNPGLLEKAR SFLKANVEGD
KPSFVNIGGR GKPEWCFRSR LSNIYMAKVY PPASVSNTGK IRQKSPTISK TSATEVFSMA
LQLYHDKEAA AASLMNGDGL LELLLGVAKE LNNAD
Length

995

Mol. Wt

108.755 kDa

pI

5.5 (calculated)

Extinction coefficient

63,830 - 64,080 (calc based on 17 Y, 7 W, and 2 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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Structure
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Structures

<beststructure> gene=Phage_P1_ddrB taxon=10678 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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