Phage P1 16:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

gp16

Synonyms

gp034

Product description

baseplate or tail tube structural protein; region of aa 1..114 100 pct identical to previously predicted sequence of N-terminal fragment of pep42 orf (putative gene 16) of P1 PID:g2661104; region of aa 113..278 100 pct identical to previously predicted sequence of C-terminal fragment of gp16 Swissprot:VG16_BPP1; similar to predicted product of ORF46 of Streptococcus thermophilus temperate bacteriophage O1205 PID:g2444125;

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0098003

viral tail assembly

PMID:6834479[1]

IMP: Inferred from Mutant Phenotype

P

Table 1, figure 17

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

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Notes

Localization

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Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MQRSWFNHRL TSAKQKSLLY KSLADLVQSM MDTFVDPWLE RITNRKSIFS MSKEDLETRT
NELGQFFTIR TSNSSSVPML LQQRLDEIHF KGTERPINQT IYREFNGISV LWDPIYAPVD
LERHPYGTVL IPESTLETTG GTFGEMFLTS RGMISIPIND LARTMGITGT IDQSAITEEI
LRKFNQFVKP LLPLHIVFDG LTLYLSVVVN EHADMITLNE ISDTEKAYCW FETSDTTSLT
GVTSISAPIT ATPGGTIVKA TPTFDRTRAD DLLLDSDA
Length

278

Mol. Wt

31.358 kDa

pI

4.9 (calculated)

Extinction coefficient

30,940 - 31,065 (calc based on 6 Y, 4 W, and 1 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References

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Structure
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Structures

<beststructure> gene=Phage_P1_16 taxon=10678 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. Walker, JT & Walker, DH Jr (1983) Coliphage P1 morphogenesis: analysis of mutants by electron microscopy. J. Virol. 45 1118-39 PubMed

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