Phage MS2 rep:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

rep

Synonyms

MS2g4 [1]

Product description

RNA replicase β subunit

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0003968

RNA-directed RNA polymerase activity

PMID:14173008[2]

IDA: Inferred from Direct Assay

F

complete

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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

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Notes

Localization

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Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MSKTTKKFNS LCIDLPRDLS LEIYQSIASV ATGSGDPHSD DFTAIAYLRD ELLTKHPTLG
SGNDEATRRT LAIAKLREAN GDRGQINREG FLHDKSLSWD PDVLQTSIRS LIGNLLSGYR
SSLFGQCTFS NGAPMGHKLQ DAAPYKKFAE QATVTPRALR AALLVRDQCA PWIRHAVRYN
ESYEFRLVVG NGVFTVPKNN KIDRAACKEP DMNMYLQKGV GAFIRRRLKS VGIDLNDQSI
NQRLAQQGSV DGSLATIDLS SASDSISDRL VWSFLPPELY SYLDRIRSHY GIVDGETIRW
ELFSTMGNGF TFELESMIFW AIVKATQIHF GNAGTIGIYG DDIICPSEIA PRVLEALAYY
GFKPNLRKTF VSGLFRESCG AHFYRGVDVK PFYIKKPVDN LFALMLILNR LRGWGVVGGM
SDPRLYKVWV RLSSQVPSMF FGGTDLAADY YVVSPPTAVS VYTKTPYGRL LADTRTSGFR
LARIARERKF FSEKHDSGRY IAWFHTGGEI TDSMKSAGVR VIRTSEWLTP VPTFPQECGP
ASSPR
Length

545

Mol. Wt

60.839 kDa

pI

9.5 (calculated)

Extinction coefficient

80,790 - 81,665 (calc based on 21 Y, 9 W, and 7 C residues)

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Domains/Motifs/Modification Sites

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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

243 - 373

RdRp catalytic

UniProt:P00585


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Structure
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Structures

<beststructure> gene=Phage_MS2_rep taxon=12022 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. NCBI: Enterobacterio phage MS2, complete genome http://www.ncbi.nlm.nih.gov/nuccore/NC_001417
  2. WEISSMANN, C et al. (1964) REPLICATION OF VIRAL RNA. IV. PROPERTIES OF RNA SYNTHETASE AND ENZYMATIC SYNTHESIS OF MS2 PHAGE RNA. Proc. Natl. Acad. Sci. U.S.A. 51 890-7 PubMed

Categories

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