cynR:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
| Standard name |
CynR product |
|---|---|
| Synonyms |
DNA-binding transcriptional dual regulator product[1], B0338 product[2][1], CynR product[2][1], cyn operon positive regulator product[2][1] |
| Product description | |
| EC number (for enzymes) |
|
| edit table | |
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Notes
Function
Gene Ontology
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0006350 |
transcription |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0006805 |
xenobiotic metabolic process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0016564 |
transcription repressor activity |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc 11.1[3]. |
complete | |||
| GO:0005737 |
cytoplasm |
C |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0016563 |
transcription activator activity |
IMP: Inferred from Mutant Phenotype |
F |
Seeded from EcoCyc 11.1[3]. |
complete | |||
| GO:0016563 |
transcription activator activity |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc 11.1[3]. |
complete | |||
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Interactions
| Partner Type | Partner | Notes |
|---|---|---|
|
DNA |
Cite error: Closing | |
|
Protein |
Self |
Cite error: Closing |
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Notes
Localization
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
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Notes
Structure and Physical Properties
Physical Properties
| Sequence |
MLSRHINYFL AVAEHGSFTR AASALHVSQP ALSQQIRQLE ESLGVPLFDR SGRTIRLTDA GEVWRQYASR ALQELGAGKR AIHDVADLTR GSLRIAVTPT FTSYFIGPLM ADFYARYPSI TLQLQEMSQE KIEDMLCRDE LDVGIAFAPV HSPELEAIPL LTESLALVVA QHHPLAVHEQ VALSRLHDEK LVLLSAEFAT REQIDHYCEK AGLHPQVVIE ANSISAVLEL IRRTSLSTLL PAAIATQHDG LKAISLAPPL LERTAVLLRR KNSWQTAAAK AFLHMALDKC AVVGGNESR |
|---|---|
| Mol. Wt |
32.96 kDa (calc) [2] |
| pI |
6.66[2] |
| Extinction coefficient |
19940 - 20315 (calc based on 6 Y, 2 W, and 3 C residues) |
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Domains/Motifs/Modification Sites
| Type | Residues | Description | Notes |
|---|---|---|---|
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Structure
| Structure Type | Organism | Accession | Residues covered | Notes |
|---|---|---|---|---|
|
X-ray |
E. coli |
2HXR |
92-291 |
Regulatory domain without ligand |
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Notes
Gene Product Resources
| Resource type | Source | Notes/Reference |
|---|---|---|
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Notes
Accessions in Other Databases
| Database | Accession | Notes |
|---|---|---|
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Notes
Links
| Name | URL | Comments |
|---|---|---|
|
This is a link |
||
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 Lamblin, AF & Fuchs, JA (1993) Expression and purification of the cynR regulatory gene product: CynR is a DNA-binding protein. J. Bacteriol. 175 7990-9 PubMed
- ↑ Sung, YC & Fuchs, JA (1992) The Escherichia coli K-12 cyn operon is positively regulated by a member of the lysR family. J. Bacteriol. 174 3645-50 PubMed
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