fabF:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

FabF product

Synonyms

3-oxoacyl-[acyl-carrier-protein] synthase II[1], B1095[2][1], Vtr[2][1], Cvc[2][1], VtrB[2][1], FabJ[2][1], FabF[2][1]

Product description

FabF[2]; FabF[3]; Component of 3-oxoacyl-ACP synthase II[2]

EC number (for enzymes)
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Notes

Function

Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status

GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006654

phosphatidic acid biosynthetic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

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Interactions

Partner Type Partner Notes

Protein

Subunits of 3-oxoacyl-ACP synthase II

could be indirect

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Notes

Localization

Notes

Structure and Physical Properties

Physical Properties

Sequence

at EcoCyc

MSKRRVVVTG LGMLSPVGNT VESTWKALLA GQSGISLIDH FDTSAYATKF AGLVKDFNCE
DIISRKEQRK MDAFIQYGIV AGVQAMQDSG LEITEENATR IGAAIGSGIG GLGLIEENHT
SLMNGGPRKI SPFFVPSTIV NMVAGHLTIM YGLRGPSISI ATACTSGVHN IGHAARIIAY
GDADVMVAGG AEKASTPLGV GGFGAARALS TRNDNPQAAS RPWDKERDGF VLGDGAGMLV
LEEYEHAKKR GAKIYAELVG FGMSSDAYHM TSPPENGAGA ALAMANALRD AGIEASQIGY
VNAHGTSTPA GDKAEAQAVK TIFGEAASRV LVSSTKSMTG HLLGAAGAVE SIYSILALRD
QAVPPTINLD NPDEGCDLDF VPHEARQVSG MEYTLCNSFG FGGTNGSLIF KKI
Mol. Wt

43.05 kDa (calc) [2]

pI
Extinction coefficient

25900 - 26400 (calc based on 10 Y, 2 W, and 4 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes

X-RAY DIFFRACTION

Escherichia coli

1KAS BETA-KETOACYL-ACP SYNTHASE II FROM ESCHERICHIA COLI

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Notes

Gene Product Resources

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:3-OXOACYL-ACP-SYNTHII-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0AAI5

PFAM (EcoliWiki Page)

PFAM:PF00109

RefSeq (EcoliWiki Page)

RefSeq:NP_415613

PDB (EcoliWiki Page)

PDB:1KAS

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Notes

Links

References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7