yaaW:Gene

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Nomenclature Location(s) and DNA Sequence Alleles and Phenotypes Genetic Resources Accessions Links References Suggestions

Nomenclature

Standard name

yaaW

Mnemonic
Synonyms

ECK0011, b0011, JW0010, htpY[1]

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Notes

Location(s) and DNA Sequence

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

0.23 minutes 

MG1655: 11356..10643
gbrowse_img.php?coord=9643..12356&genome=ecoli&name=MG1655&trackset=0&width=300&.png

W3110

 

W3110: 11356..10643
gbrowse_img.php?coord=9643..12356&genome=ecoli_W3110&name=W3110&trackset=0&width=300&.png

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Notes

Sequence Features

Feature type Location Description
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Notes

Alleles and Phenotypes

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference CGSC Mutation ID #

 

 

 

 

 

 

 

 

 

 

 

 

 

 

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Notes

Genetic Resources

Resource Resource Type Source Notes/Reference

JW0010

Plasmid clone

Shigen

PMID:16769691[2]

Status:Clone OK

Primer 1:GCCAATGTTAATTACCTGAATGA

Primer 2:CCGACCTGAGTGGCGCTAACCAT

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Notes

Accessions in Other Databases

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G6082

EchoBASE (EcoliWiki Page)

EchoBASE:EB4086

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0011

ECOL199310CYC (EcoliWiki Page)

ECOL199310CYC:C0016

EcoGene (EcoliWiki Page)

EcoGene:EG14340

ECOO157CYC (EcoliWiki Page)

ECOO157CYC:Z0011

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Notes

Links

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References

See Help:References for how to manage references in EcoliWiki.

  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed