hpt:Evolution: Difference between revisions

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Revision as of 01:38, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT1G71750 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000006872 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000019547 (score: 0.868)
  • ENSBTAP00000030572 (score: 0.801)
  • ENSBTAP00000028120 (score: 0.730)
  • ENSBTAP00000019950 (score: 0.473)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038963 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00013690 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000027831 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000006328 (score: 0.508)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006233 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-CDNA-040425-2865 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-040426-1918 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040625-14 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040625-25 (score: 0.695)
  • ZDB-GENE-040625-17 (score: 0.695)
  • ZDB-CDNA-040625-196 (score: 0.563)
  • ZDB-GENE-980526-324 (score: 0.563)
  • ZDB-CDNA-040425-380 (score: 0.560)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0216388 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000009829 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000033179 (score: 0.657)
  • ENSGALP00000030603 (score: 0.570)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000298556 (score: 1.000; bootstrap: 100%)
  • ENSP00000318602 (score: 0.579)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000010889 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000019043 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000010875 (score: 0.550)
  • ENSMODP00000002497 (score: 0.345)

From Inparanoid:20070104

Mus musculus

  • MGI:96217 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000004004 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000041182 (score: 0.239)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000050910 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000037266 (score: 0.560)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000155659 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000176529 (score: 0.378)
  • NEWSINFRUP00000136250 (score: 0.320)
  • NEWSINFRUP00000136242 (score: 0.314)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00028357001 (score: 1.000; bootstrap: 100%)
  • GSTENP00012473001 (score: 0.504)
  • GSTENP00022748001 (score: 0.343)
  • GSTENP00010877001 (score: 0.287)
  • GSTENP00025492001 (score: 0.199)
  • GSTENP00025491001 (score: 0.108)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000042790 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000012985 (score: 0.366)

From Inparanoid:20070104

Shigella flexneri

HPT

From SHIGELLACYC

E. coli O157

HPT

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00156


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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