ftsL:Expression: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Fixing GBrowse image on Expression pages.
Update TableEdit tables.
Line 36: Line 36:
*  
*  
****************************************************************************************** -->{{Help Cellular levels}}
****************************************************************************************** -->{{Help Cellular levels}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="W49c026fa03d55" class=" tableEdit MoleculesPerCellTable"   
|- align='left' bgcolor='#CCCCFF'
|-
!|Molecule!!Organism or Strain!!Cellular level!!Units!!Medium!!Temperature °C!!Other (e.g. anaerobic)!!Growth rate!!Assay used!!Notes!!Reference(s)
!|Molecule!!Organism or Strain!!Cellular level!!Units!!Medium!!Temperature °C!!Other (e.g. anaerobic)!!Growth rate!!Assay used!!Notes!!Reference(s)
|-  
|-  
Line 63: Line 63:
PMID:1332942  
PMID:1332942  


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.32700.W49c026fa03d55&page=32700&pagename={{FULLPAGENAMEE}}&type=0&template=MoleculesPerCellTable edit table] || || || || || || || || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.32700.W49c026fa03d55&page=32700&pagename={{FULLPAGENAMEE}}&type=0&template=MoleculesPerCellTable edit table]</span> || || || || || || || || || ||
|}
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.32700.W49c026fa03d55-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.32700.W49c026fa03d55-->
Line 82: Line 82:
*  
*  
****************************************************************************************** -->{{expression_transcription_help}}
****************************************************************************************** -->{{expression_transcription_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="T46ab36f6c4246" class=" tableEdit Expression_operons_table"   
|- {{table heading style}}
|-
!|Transcription unit(s)
!|Transcription unit(s)
|-  
|-  
Line 89: Line 89:
[[:Category:Txn_unit:mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ|mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ]]  
[[:Category:Txn_unit:mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ|mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ]]  


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.T46ab36f6c4246&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_operons_table edit table]
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.T46ab36f6c4246&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_operons_table edit table]</span>
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.T46ab36f6c4246-->||{{RegulonDBfig|ECK120001074.jpg|FTSL}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.T46ab36f6c4246-->||{{RegulonDBfig|ECK120001074.jpg|FTSL}}
Line 123: Line 123:
*  
*  
****************************************************************************************** -->{{Expression_allele_table_help}}
****************************************************************************************** -->{{Expression_allele_table_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="A46ab36f78b84a" class=" tableEdit Expression_allele_table"   
|- {{table_heading_style}}
|-
!|Allele Name!!Mutation!!Phenotype!!Reference
!|Allele Name!!Mutation!!Phenotype!!Reference


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.A46ab36f78b84a&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_allele_table edit table] || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.A46ab36f78b84a&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_allele_table edit table]</span> || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.A46ab36f78b84a-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.A46ab36f78b84a-->
Line 141: Line 141:
*  
*  
****************************************************************************************** -->{{Expression_studies_table_help}}
****************************************************************************************** -->{{Expression_studies_table_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="C46ab36f7f2c3b" class=" tableEdit Expression_studies_table"   
|- {{table heading style}}
|-
!|Type!!Reference!!Notes
!|Type!!Reference!!Notes
|-  
|-  
Line 159: Line 159:
Summary of data for ftsL from multiple microarray studies   
Summary of data for ftsL from multiple microarray studies   


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.C46ab36f7f2c3b&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_studies_table edit table] || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.C46ab36f7f2c3b&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_studies_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.C46ab36f7f2c3b-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.C46ab36f7f2c3b-->
Line 173: Line 173:
*  
*  
****************************************************************************************** -->{{Expression_resource_table_help}}
****************************************************************************************** -->{{Expression_resource_table_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="G46ab36f864892" class=" tableEdit Expression_resource_table"   
|- {{table heading style}}
|-
!|Resource Name!!Resource Type!!Description!!Source!!Notes
!|Resource Name!!Resource Type!!Description!!Source!!Notes


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.G46ab36f864892&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_resource_table edit table] || || || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.G46ab36f864892&page=32700&pagename={{FULLPAGENAMEE}}&type=&template=Expression_resource_table edit table]</span> || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.G46ab36f864892-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.G46ab36f864892-->
Line 195: Line 195:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="E46ab36f8ce265" class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|-
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-  
|-  
Line 227: Line 227:
   
   


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.E46ab36f8ce265&page=32700&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.E46ab36f8ce265&page=32700&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.E46ab36f8ce265-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.E46ab36f8ce265-->
Line 245: Line 245:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="A46a7a4c61ff51" class=" tableEdit Links_table"   
|- {{table_heading_style}}
|-
!|Name!!URL!!Comments
!|Name!!URL!!Comments


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.A46a7a4c61ff51&page=32700&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.32700.A46a7a4c61ff51&page=32700&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.A46a7a4c61ff51-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.32700.A46a7a4c61ff51-->

Revision as of 01:14, 9 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

[back to top]


See Help:Cellular levels

Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)

Protein

E. coli LMG83, LMG145, LMG142 (see table 1)

20 - 40

molecules/cell

NZY (rich media, recipe described on page 7717)

37

enzyme activity

A chromosomal FtsL-phoA (alkaline phosphatase) fusion was assayed for AP activity & shown to be relatively comparable to the previously reported activity/concentration of FtsQ-phoA estimated at 20-40 molecules per cell (reported by Carson et al., PMID:2007547[1]).

PMID:1332942[2]

edit table

Notes

Transcription and Transcriptional Regulation

[back to top]


See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ

edit table
Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

[back to top]


gbrowse_img.php?coord=91012..91052&genome=ecoli&name=MG1655&trackset=Gene+DNA_+Protein&width=400&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

[back to top]


Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
edit table


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b0083 (EcoliWiki Page)

NCBI GEO profiles for ftsL

microarray

GenExpDB:b0083 (EcoliWiki Page)

Summary of data for ftsL from multiple microarray studies

edit table


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
edit table

<protect>

Notes

Accessions Related to ftsL Expression

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11086

EchoBASE (EcoliWiki Page)

EchoBASE:EB1078

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0083

EcoGene (EcoliWiki Page)

EcoGene:EG11086


edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ Carson, MJ et al. (1991) The FtsQ protein of Escherichia coli: membrane topology, abundance, and cell division phenotypes due to overproduction and insertion mutations. J. Bacteriol. 173 2187-95 PubMed
  2. ↑ Guzman, LM et al. (1992) FtsL, an essential cytoplasmic membrane protein involved in cell division in Escherichia coli. J. Bacteriol. 174 7716-28 PubMed

Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ftsL:Expression&oldid=978679"