aspC:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Fixing references section.
Update TableEdit tables.
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="D46abb2e0b3aa0" class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|-
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
|-  
|-  
Line 262: Line 262:
From ECOO157CYC  
From ECOO157CYC  


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45825.D46abb2e0b3aa0&page=45825&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table] || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45825.D46abb2e0b3aa0&page=45825&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45825.D46abb2e0b3aa0-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45825.D46abb2e0b3aa0-->
Line 287: Line 287:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="O46abb30eecf08" class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|-
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-  
|-  
Line 298: Line 298:
   
   


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45825.O46abb30eecf08&page=45825&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45825.O46abb30eecf08&page=45825&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45825.O46abb30eecf08-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45825.O46abb30eecf08-->
Line 316: Line 316:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{|   id="L46a7ffe2b98ea" class=" tableEdit Links_table"   
|- {{table_heading_style}}
|-
!|Name!!URL!!Comments
!|Name!!URL!!Comments


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45825.L46a7ffe2b98ea&page=45825&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45825.L46a7ffe2b98ea&page=45825&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45825.L46a7ffe2b98ea-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45825.L46a7ffe2b98ea-->

Revision as of 00:08, 9 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000016571 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000011707 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000030487 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G19550 (score: 1.000; bootstrap: 100%)
  • AT5G11520 (score: 0.734)
  • AT1G62800 (score: 0.656)
  • AT4G31990 (score: 0.206)
  • AT2G30970 (score: 0.141)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000009440 (score: 1.000; bootstrap: 99%)
  • ENSBTAP00000015873 (score: 0.118)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00027571 (score: 1.000; bootstrap: 99%)
  • WBGene00040842 (score: 0.508)
  • WBGene00036252 (score: 0.063)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00016652 (score: 1.000; bootstrap: 99%)
  • WBGene00015778 (score: 0.498)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000012308 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000013922 (score: 0.139)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007609 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-7917 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1516 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3650 (score: 0.783)
  • ZDB-GENE-040426-2703 (score: 0.783)
  • ZDB-CDNA-040425-2950 (score: 0.116)
  • ZDB-GENE-040426-2003 (score: 0.116)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230092 (score: 1.000; bootstrap: 100%)
  • DDB0230093 (score: 0.107)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0001125 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18050-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000003646 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000012086 (score: 0.156)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000245206 (score: 1.000; bootstrap: 99%)
  • ENSP00000239123 (score: 0.147)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000007886 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000025373 (score: 0.167)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000017818 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000004345 (score: 0.139)

From Inparanoid:20070104

Mus musculus

  • MGI:95792 (score: 1.000; bootstrap: 100%)
  • MGI:95791 (score: 0.133)

From Inparanoid:20070104

Oryza gramene

  • P37833 (score: 1.000; bootstrap: 100%)
  • Q42391 (score: 1.000; bootstrap: 100%)
  • Q5JMF4 (score: 1.000; bootstrap: 100%)
  • Q7F594 (score: 1.000; bootstrap: 100%)
  • Q84V24 (score: 0.236)
  • Q6KAJ2 (score: 0.236)
  • Q42425 (score: 0.225)
  • Q43057 (score: 0.136)
  • Q6EUS6 (score: 0.125)
  • Q43305 (score: 0.125)
  • Q5Z7I8 (score: 0.108)
  • O48599 (score: 0.102)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000013976 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000004968 (score: 0.138)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000015956 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000051464 (score: 0.742)
  • ENSRNOP00000041826 (score: 0.714)
  • ENSRNOP00000022309 (score: 0.132)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YLR027C (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC7251 (score: 1.000; bootstrap: 100%)
  • SPAC10F63c (score: 0.115)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000130060 (score: 0.146)
  • NEWSINFRUP00000162658 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000128916 (score: 0.131)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003870001 (score: 1.000; bootstrap: 99%)
  • GSTENP00010691001 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000034675 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

ASPC

From SHIGELLACYC

E. coli O157

ASPC

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00155


edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=aspC:Evolution&oldid=974107"