Plasmid F traJ:Gene Product(s): Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Fixing references section.
Fixing box_uid problem.
Line 28: Line 28:
</noinclude>
</noinclude>
==Nomenclature==
==Nomenclature==
<!--box uid=421aa90e079fa326b6494f812ad13e79..L46b16a8a902bf-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..K4a48fc258bcf7-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 57: Line 57:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..L46b16a8a902bf&page=&pagename={{FULLPAGENAMEE}}&type=1&template=Product_nomenclature_table edit table] ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..K4a48fc258bcf7&page=&pagename={{FULLPAGENAMEE}}&type=1&template=Product_nomenclature_table edit table] ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..L46b16a8a902bf-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..K4a48fc258bcf7-->
{{Product_nomenclature_help}}
{{Product_nomenclature_help}}
<protect><!--Nomenclature_notes--></protect>
<protect><!--Nomenclature_notes--></protect>
Line 69: Line 69:
<protect>
<protect>
<big>'''Gene Ontology'''</big>
<big>'''Gene Ontology'''</big>
<!--box uid=421aa90e079fa326b6494f812ad13e79..Z46b16a8b6ab7a-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..Q4a48fc2593493-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 81: Line 81:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..Z46b16a8b6ab7a&page=&pagename={{FULLPAGENAMEE}}&type=&template=GO_table_product edit table] || || || || || || || ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..Q4a48fc2593493&page=&pagename={{FULLPAGENAMEE}}&type=&template=GO_table_product edit table] || || || || || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..Z46b16a8b6ab7a-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..Q4a48fc2593493-->
{{Product_GO_help}}
{{Product_GO_help}}


Line 94: Line 94:


==Localization==
==Localization==
<!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16a8d1838d-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..Q4a48fc259aab6-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 106: Line 106:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..D46b16a8d1838d&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_localization_table edit table] || || ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..Q4a48fc259aab6&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_localization_table edit table] || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16a8d1838d-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..Q4a48fc259aab6-->
{{Product_localization_help}}
{{Product_localization_help}}
<protect><!--Localization_notes--></protect>
<protect><!--Localization_notes--></protect>
Line 119: Line 119:
<protect>
<protect>
<span id="Sequence"></span><big>'''Physical Properties'''</big>
<span id="Sequence"></span><big>'''Physical Properties'''</big>
<!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16a8dc1c09-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..J4a48fc25a2056-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 153: Line 153:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..D46b16a8dc1c09&page=&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table] ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..J4a48fc25a2056&page=&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table] ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16a8dc1c09-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..J4a48fc25a2056-->
{{Product_physical_properties_help}}
{{Product_physical_properties_help}}


<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span><table>
<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span><table>
<tr align="left" valign="top">
<tr align="left" valign="top">
<td><!--box uid=421aa90e079fa326b6494f812ad13e79..N46b16a8eb360a-->
<td><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25a9684-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 172: Line 172:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..N46b16a8eb360a&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table] || || ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25a9684&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table] || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..N46b16a8eb360a-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25a9684-->
{{Product_domains_motifs_help}}</td>
{{Product_domains_motifs_help}}</td>
<td>
<td>
Line 185: Line 185:


<span id="Structure"></span><big>'''Structure'''</big>
<span id="Structure"></span><big>'''Structure'''</big>
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46b16a8f794c1-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25b0cdd-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 200: Line 200:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..S46b16a8f794c1&page=&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table]
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25b0cdd&page=&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table]
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..S46b16a8f794c1-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25b0cdd-->
{{Product_structure_help}}
{{Product_structure_help}}
<!--Structure_notes--></protect>
<!--Structure_notes--></protect>
Line 210: Line 210:
==Gene Product Resources==
==Gene Product Resources==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..X46b16a90514cd-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25b840b-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 222: Line 222:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..X46b16a90514cd&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_resource_table edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25b840b&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_resource_table edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..X46b16a90514cd-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..B4a48fc25b840b-->
{{Product_resources_help}}
{{Product_resources_help}}
<protect><!--Resources_notes--></protect>
<protect><!--Resources_notes--></protect>
Line 232: Line 232:
==Accessions in Other Databases==
==Accessions in Other Databases==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16a9134310-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..Z4a48fc25bfbe7-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 244: Line 244:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..D46b16a9134310&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..Z4a48fc25bfbe7&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..D46b16a9134310-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..Z4a48fc25bfbe7-->
{{Product_accessions_help}}
{{Product_accessions_help}}
<protect><!--Accessions_notes--></protect>
<protect><!--Accessions_notes--></protect>
Line 254: Line 254:
==Links==
==Links==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79..O46b16a921ee96-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..I4a48fc25c73a9-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 266: Line 266:


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..O46b16a921ee96&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d..I4a48fc25c73a9&page=&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..O46b16a921ee96-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d..I4a48fc25c73a9-->
{{Links_help}}
{{Links_help}}


Revision as of 17:38, 29 June 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

traJ

Synonyms

traJ, Fpla074

Product description

traJ

this activator promotes transcription initiation upstream of the traY gene in the transfer operon

EC number (for enzymes)


edit table

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

[back to top]


Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
edit table

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Notes
edit table

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.


Notes

Structure and Physical Properties

[back to top]


Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence 
MYPMDRIQQK HARQIDLLEN LTAVIQDYPN PACIRDETGK FIFCNTLFHE SFLTQDQSAE
KWLLSQRDFC ELISVTEMEA YRNEHTHLNL VEDVFIQNRF WTISVQSFLN GHRNIILWQF
YDAAHVRHKD SYNQKTIVSD DIRNIIRRMS DDSSVSSYVN DVFYLYSTGI SHNAIARILN
ISISTSKKHA SLICDYFSVS NKDELIILLY NKKFIYYLYE KAMCIINTR
Length

229

Mol. Wt

27.062 kDa

pI

6.9 (calculated)

Extinction coefficient

35,870 - 36,495 (calc based on 13 Y, 3 W, and 5 C residues)

edit table

See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes
edit table
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

<motif_map/>

Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures
Models
edit table

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Notes

Gene Product Resources

[back to top]


See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
edit table

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
edit table

See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=Plasmid_F_traJ:Gene_Product(s)&oldid=913561"