yjbH:Quickview: Difference between revisions

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===Notes===
===Notes===
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Overexpression of the yjbEFGH operon alters colony morphology and leads to production of a novel extracellular polysaccharide (Ferrieres, 2007). yjbH and gfcD are paralogs. YjbH  has both type II (18 aa) and (somewhat better) type I (21 aa) signal peptide predictions by LipoP. YjbH is not likely to be a lipoprotein because the lipobox Cys is poorly conserved.<ref name='LIB:EcoGene'/>





Revision as of 01:42, 3 March 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Gene Name

yjbH (synonyms: ECK4021, b4029, JW3989)[1]

Product(s)

YjbH product[1]: predicted porin product, B4029 product

Description

conserved protein, putative lipoprotein and/or outer membrane porin[2] predicted porin[3]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yjbF[2], yjbEFGH[3]

Regulation/Activity


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Notes

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Overexpression of the yjbEFGH operon alters colony morphology and leads to production of a novel extracellular polysaccharide (Ferrieres, 2007). yjbH and gfcD are paralogs. YjbH has both type II (18 aa) and (somewhat better) type I (21 aa) signal peptide predictions by LipoP. YjbH is not likely to be a lipoprotein because the lipobox Cys is poorly conserved.[4]



References

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  1. ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.