ykfJ:Gene Product(s): Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Data loaded by TableEdit_Loader.
imported>Wikientrybot
Move help links into the <above> tag inside templates.
Line 59: Line 59:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.F46aa24f94aaab-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.F46aa24f94aaab-->
{{Product_nomenclature_help}}
 
<protect><!--Nomenclature_notes--></protect>
<protect><!--Nomenclature_notes--></protect>
===Notes===
===Notes===
Line 67: Line 67:
{{BacktoTop}}
{{BacktoTop}}
<protect>
<protect>
<big>'''Gene Ontology'''</big><br />{{Product_GO_help}}<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.S46aa24fa4009e-->
<big>'''Gene Ontology'''</big><br /><!--box uid=421aa90e079fa326b6494f812ad13e79.20068.S46aa24fa4009e-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 98: Line 98:
Protein
Protein
|
|
[[btuD:Gene_Product(s)|btuD]]<br />
btuD<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  
|-  
|-  
|
|
Protein
Protein
|
|
[[rpmB:Gene_Product(s)|rpmB]]<br />
rpmB<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  
|-  
|-  
|
|
Protein
Protein
|
|
[[groL:Gene_Product(s)|groL]]<br />
groL<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  
|-  
|-  
|
|
Protein
Protein
|
|
[[rplB:Gene_Product(s)|rplB]]<br />
rplB<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  
|-  
|-  
|
|
Protein
Protein
|
|
[[ybiI:Gene_Product(s)|ybiI]]<br />
ybiI<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  
|-  
|-  
|
|
Protein
Protein
|
|
[[yfiM:Gene_Product(s)|yfiM]]<br />
yfiM<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  
|-  
|-  
|
|
Protein
Protein
|
|
[[chaB:Gene_Product(s)|chaB]]<br />
chaB<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  
|-  
|-  
|
|
Protein
Protein
|
|
[[rpsI:Gene_Product(s)|rpsI]]<br />
rpsI<br />
|
|


|[[PMID:16606699]]<ref name=PMID:16606699/>
|[[PMID:16606699]]<ref name=PMID:16606699/>
|
|
Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1135979 EBI-1135979]<br />  
Experiment(s):EBI-1135979<br />  


|-class='sortbottom'
|-class='sortbottom'
Line 179: Line 179:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.Z46aa24fab0258-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.Z46aa24fab0258-->
{{Product_interactions_help}}
 
<!--Function_notes--></protect>
<!--Function_notes--></protect>
===Notes===
===Notes===
Line 200: Line 200:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.K46a7b636da2c3-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.K46a7b636da2c3-->
{{Product_localization_help}}
 
<protect><!--Localization_notes--></protect>
<protect><!--Localization_notes--></protect>


Line 242: Line 242:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.Y46aa24fc6e6e5-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.Y46aa24fc6e6e5-->
{{Product_physical_properties_help}}
 


<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span>
<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span>
Line 260: Line 260:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.X46aa24fcc6e1b-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.X46aa24fcc6e1b-->
{{Product_domains_motifs_help}}
 


<span id="Structure"></span><big>'''Structure'''</big>
<span id="Structure"></span><big>'''Structure'''</big>
Line 293: Line 293:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.V46a7b6388012b-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.V46a7b6388012b-->
{{Product_structure_help}}
 
<!--Structure_notes--></protect>
<!--Structure_notes--></protect>
===Notes===
===Notes===
Line 315: Line 315:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.I46aa24fd66524-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.I46aa24fd66524-->
{{Product_resources_help}}
 
<protect><!--Resources_notes--></protect>
<protect><!--Resources_notes--></protect>
===Notes===
===Notes===
Line 365: Line 365:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.K46aa24fdafb5c-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.K46aa24fdafb5c-->
{{Product_accessions_help}}
 
<protect><!--Accessions_notes--></protect>
<protect><!--Accessions_notes--></protect>
===Notes===
===Notes===
Line 387: Line 387:
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.L46a7b63b46007-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.20068.L46a7b63b46007-->
{{Links_help}}
 




Line 394: Line 394:
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
__NOTOC__
__NOTOC__

Revision as of 23:07, 9 February 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

YkfJ

Synonyms

conserved protein[1], YkfJ[2][1], B0235[2][1]

Product description

hypothetical protein[2]; conserved protein[3]

EC number (for enzymes)
edit table


Notes

Function

[back to top]


Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
edit table

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

btuD

 PMID:16606699[4]

Experiment(s):EBI-1135979

Protein

rpmB

 PMID:16606699[4]

Experiment(s):EBI-1135979

Protein

groL

 PMID:16606699[4]

Experiment(s):EBI-1135979

Protein

rplB

 PMID:16606699[4]

Experiment(s):EBI-1135979

Protein

ybiI

 PMID:16606699[4]

Experiment(s):EBI-1135979

Protein

yfiM

 PMID:16606699[4]

Experiment(s):EBI-1135979

Protein

chaB

 PMID:16606699[4]

Experiment(s):EBI-1135979

Protein

rpsI

 PMID:16606699[4]

Experiment(s):EBI-1135979

edit table


Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Notes
edit table


Notes

Structure and Physical Properties

[back to top]


Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

MEWYMGKYIR PLSDAVFTIA SDDLWIESLA IQQLHTTANL PNMQRVVGMP DLHPGRGYPI
GAAFFSVGRF YPARRRGNGA GNRNGPLL
Mol. Wt

9.82 kDa (calc) [2]

pI
Extinction coefficient

16960 (calc based on 4 Y, 2 W, and 0 C residues)

edit table


Domains/Motifs/Modification Sites See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes
edit table


Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure>ykfJ 562</beststructure>

Models

View models at:

edit table


Notes

Gene Product Resources

[back to top]


See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
edit table


Notes

Accessions in Other Databases

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G6119-MONOMER

UniProt (EcoliWiki Page)

UniProt:P75675

RefSeq (EcoliWiki Page)

RefSeq:NP_414770

ModBase (EcoliWiki Page)

ModBase:P75675


edit table


Notes

Links

[back to top]


Name URL Comments
edit table



References

[back to top]


  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ykfJ:Gene_Product(s)&oldid=709419"