insN-2:Expression: Difference between revisions

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[[:Category:Txn_unit:insN|insN]]  
[[:Category:Txn_unit:insN|insN]]  
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===Notes===
===Notes===
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!Allele Name!!Mutation!!Phenotype!!Reference
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<big>'''Expression Studies'''</big>
<big>'''Expression Studies'''</big>
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microarray  
microarray
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[http://genexpdb.ou.edu/index.php?query=b4283 GenExpDB:b4283] ([[EcoliGenExpDB|EcoliWiki Page]])  
[[geoprofiles:b4283|GEO Profiles:b4283]] ([[Gene_Expression_Omnibus_%28GEO%29|EcoliWiki Page]])
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Summary of data for insN-2 from multiple microarray studies 
NCBI GEO profiles for ''insN-2''
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microarray
microarray  
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[[geoprofiles:b4283|GEO Profiles:b4283]] ([[Gene_Expression_Omnibus_%28GEO%29|EcoliWiki Page]])
[http://genexpdb.ou.edu/index.php?query=b4283 GenExpDB:b4283] ([[EcoliGenExpDB|EcoliWiki Page]])  
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NCBI GEO profiles for ''insN-2''
Summary of data for insN-2 from multiple microarray studies 


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<big>'''Expression Resources'''</big>
<big>'''Expression Resources'''</big>
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GFP Fusion
GFP Fusion
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Intergenic region (269333..269539) fused to <i>gfpmut2</i>.
Intergenic region (4504604..269522) fused to <i>gfpmut2</i>.
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[http://www.openbiosystems.com/GeneExpression/Non-Mammalian/Bacteria/EcoliPromoters/ OpenBioSystems][[Category:Genes in OpenBioSystems with Promoter Fusions]]
[http://www.openbiosystems.com/GeneExpression/Non-Mammalian/Bacteria/EcoliPromoters/ OpenBioSystems][[Category:Genes in OpenBioSystems with Promoter Fusions]]
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GFP fusion described in Zaslaver, <i>et al.</i><br />Plate:109-AZ14; Well:A3<ref name="PMID:16862137" />  
GFP fusion described in Zaslaver, <i>et al.</i><br />Plate:109-AZ02; Well:G10<ref name="PMID:16862137" />  
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GFP Fusion
GFP Fusion
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Intergenic region (4504604..269522) fused to <i>gfpmut2</i>.
Intergenic region (269333..269539) fused to <i>gfpmut2</i>.
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[http://www.openbiosystems.com/GeneExpression/Non-Mammalian/Bacteria/EcoliPromoters/ OpenBioSystems][[Category:Genes in OpenBioSystems with Promoter Fusions]]
[http://www.openbiosystems.com/GeneExpression/Non-Mammalian/Bacteria/EcoliPromoters/ OpenBioSystems][[Category:Genes in OpenBioSystems with Promoter Fusions]]
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GFP fusion described in Zaslaver, <i>et al.</i><br />Plate:109-AZ02; Well:G10<ref name="PMID:16862137" />  
Raw protomer fusion data from Zaslaver, <i>et al.</i><br />Plate:109-AZ14; Well:A3<ref name="PMID:16862137" />  


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<protect><!--Expression_experimental_notes--></protect>
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===Notes===
===Notes===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
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[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7904 EcoCyc:G7904]
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7904 EcoCyc:G7904]
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[http://www.ecoli-york.org EchoBASE] ([[EchoBASE|EcoliWiki Page]])  
[http://www.ecoli-york.org EchoBASE] ([[EchoBASE|EcoliWiki Page]])  
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[http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB4745 EchoBASE:EB4745]
[http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB4745 EchoBASE:EB4745]
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[http://chase.ou.edu/oubcf/index.php EcoliGenExpDB] ([[EcoliGenExpDB|EcoliWiki Page]])  
[http://chase.ou.edu/oubcf/index.php EcoliGenExpDB] ([[EcoliGenExpDB|EcoliWiki Page]])  
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[http://genexpdb.ou.edu/index.php?query=b4283 GenExpDB:b4283]
[http://chase.ou.edu/macro/searchlink.php?bnum=b4283 EcoliGenExpDB:b4283]
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<protect><!--Accessions_notes--></protect>
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===Notes===
===Notes===
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==References==
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__NOTOC__
__NOTOC__

Revision as of 03:58, 6 February 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

insN

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Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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gbrowse_img.php?coord=269446..269486&genome=ecoli&name=MG1655&trackset=Genes_unlabeled+DNA_unlabeled&width=400&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b4283 (EcoliWiki Page)

NCBI GEO profiles for insN-2

microarray

GenExpDB:b4283 (EcoliWiki Page)

Summary of data for insN-2 from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

GFP Fusion

Intergenic region (4504604..269522) fused to gfpmut2.

OpenBioSystems

GFP fusion described in Zaslaver, et al.
Plate:109-AZ02; Well:G10[1]

GFP Fusion

Intergenic region (269333..269539) fused to gfpmut2.

OpenBioSystems

Raw protomer fusion data from Zaslaver, et al.
Plate:109-AZ14; Well:A3[1]

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<protect>

Notes

Accessions Related to insN-2 Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G7904

EchoBASE (EcoliWiki Page)

EchoBASE:EB4745

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b4283


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Notes

Links

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Name URL Comments
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References

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  1. ↑ 1.0 1.1 Zaslaver, A et al. (2006) A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat. Methods 3 623-8 PubMed


Categories

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