yaeI:Gene Product(s): Difference between revisions

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!align=left {{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
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YaeI product
YaeI  
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!align=left {{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
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predicted phosphatase product<ref name='LIB:Riley_2006'/>, B0164 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeI product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted phosphatase<ref name='LIB:Riley_2006'/>, B0164<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table heading style}} |Product description
!align=left {{table heading style}} |Product description

Revision as of 21:22, 12 December 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

YaeI

Synonyms

predicted phosphatase[1], B0164[2][1], YaeI[2][1]

Product description

phosphodiesterase[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0046872

metal ion binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0016787

hydrolase activity

GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR004843
SP_KW:KW-0378

F

Seeded from EcoCyc 12.5 [4]

complete

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Interactions

Partner Type Partner Notes References
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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MHYCEPGWFE LIRHRLAFFK DNAAPFKILF LADLHYSRFV PLSLISDAIA LGIEQKPDLI
LLGGDYVLFD MSLNFSAFSD VLSPLAECAP TFACFGNHDR PVGTEKNHLI GETLKSAGIT
VLFNQATVIA TPNRQFELVG TGDLWAGQCK PPPASEANLP RLVLAHNPDS KEVMRDEPWD
LMLCGHTHGG QLRVPLVGEP FAPVEDKRYV AGLNAFGERH IYTTRGVGSL YGLRLNCRPE
VTMLELV
Mol. Wt

29.86 kDa (calc) [2]

pI
Extinction coefficient

25440 - 26190 (calc based on 6 Y, 3 W, and 6 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structures

<beststructure>yaeI 562</beststructure>

Models

View models at:

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG12337-MONOMER

UniProt (EcoliWiki Page)

UniProt:P37049

PFAM (EcoliWiki Page)

PFAM:PF00149

RefSeq (EcoliWiki Page)

RefSeq:NP_414706

ModBase (EcoliWiki Page)

ModBase:P37049


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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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