blr:Gene Product(s): Difference between revisions

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[[Category:GO:0042493_!_response_to_drug]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0042493_!_response_to_drug GO:0042493]  
[[Category:GO:0046677_!_response_to_antibiotic]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0046677_!_response_to_antibiotic GO:0046677]
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response to drug
response to antibiotic
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[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
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IEA: Inferred from Electronic Annotation
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[http://www.uniprot.org/keywords/KW-0046 SP_KW:KW-0046]
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P  
P
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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required fields missing 
complete
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[[Category:GO:0046677_!_response_to_antibiotic]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0046677_!_response_to_antibiotic GO:0046677]
[[Category:GO:0042493_!_response_to_drug]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0042493_!_response_to_drug GO:0042493]  
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response to antibiotic
response to drug
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[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
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IEA: Inferred from Electronic Annotation
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[http://www.uniprot.org/keywords/KW-0046 SP_KW:KW-0046]
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P
P  
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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complete
required fields missing 


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Revision as of 00:01, 20 November 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

Blr product

Synonyms

beta-lactam resistance membrane protein product[1], B4409 product[2][1], Blr product[2][1]

Product description

β-lactam resistance protein[2][3]

EC number (for enzymes)
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See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0016020

membrane

GO_REF:0000004
GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0397
SP_KW:KW-0472

C

Seeded from EcoCyc 12.5 [4]

complete

GO:0016021

integral to membrane

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0812

C

Seeded from EcoCyc 12.5 [4]

complete

GO:0046677

response to antibiotic

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0046

P

Seeded from EcoCyc 12.5 [4]

complete

GO:0042493

response to drug

P

Seeded from EcoCyc 11.1[3].

required fields missing

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Interactions

Partner Type Partner Notes References
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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes

plasma membrane


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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MNRLIELTGW IVLVVSVILL GVASHIDNYQ PPEQSASVQH K
Mol. Wt

4.56 kDa (calc) [2]

pI
Extinction coefficient

6990 (calc based on 1 Y, 1 W, and 0 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Structure

Structures

<beststructure>blr 562</beststructure>

Models

View models at:

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See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Notes

Gene Product Resources

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Resource type Source Notes/Reference
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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:MONOMER0-1561

UniProt (EcoliWiki Page)

UniProt:P56976

RefSeq (EcoliWiki Page)

RefSeq:YP_025303


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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 4.2 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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