malQ:Gene Product(s): Difference between revisions

Standard name	MalQ product
Synonyms	4-alpha-glucanotransferase (amylomaltase) product^[1], B3416 product^[2]^[1], MalA product^[2]^[1], MalQ product^[2]^[1]
Product description	AMYLOMALT-MONOMER^[2]^[3]
EC number (for enzymes)	2.4.1.25^[1]
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0003824	catalytic activity	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR013781	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0004134	4-alpha-glucanotransferase activity	GO_REF:0000002 GO_REF:0000003	IEA: Inferred from Electronic Annotation	InterPro:IPR003385 EC:2.4.1.25	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005737	cytoplasm	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0963	C	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005975	carbohydrate metabolic process	GO_REF:0000002 GO_REF:0000002 GO_REF:0000004	IEA: Inferred from Electronic Annotation	InterPro:IPR003385 InterPro:IPR013781 SP_KW:KW-0119	P	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0016052	carbohydrate catabolic process				P	Seeded from Riley et al 2006 ^[1].	required fields missing
	GO:0000272	polysaccharide catabolic process				P	Seeded from Riley et al 2006 ^[1].	required fields missing
	GO:0009313	oligosaccharide catabolic process				P	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0000025	maltose catabolic process				P	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0016740	transferase activity	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0808	F	Seeded from EcoCyc 12.5 ^[4]	complete
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Interactions

Partner Type	Partner	Notes
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Notes

Localization

Compartment	Description	Evidence	Notes
cytoplasm			From EcoCyc^[3]
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Notes

Structure and Physical Properties

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Physical Properties

Sequence	at EcoCyc MESKRLDNAA LAAGISPNYI NAHGKPQSIS AETKRRLLDA MHQRTATKVA VTPVPNVMVY TSGKKMPMVV EGSGEYSWLL TTEEGTQYKG HVTGGKAFNL PTKLPEGYHT LTLTQDDQRA HCRVIVAPKR CYEPQALLNK QKLWGACVQL YTLRSEKNWG IGDFGDLKAM LVDVAKRGGS FIGLNPIHAL YPANPESASP YSPSSRRWLN VIYIDVNAVE DFHLSEEAQA WWQLPTTQQT LQQARDADWV DYSTVTALKM TALRMAWKGF AQRDDEQMAA FRQFVAEQGD SLFWQAAFDA LHAQQVKEDE MRWGWPAWPE MYQNVDSPEV RQFCEEHRDD VDFYLWLQWL AYSQFAACWE ISQGYEMPIG LYRDLAVGVA EGGAETWCDR ELYCLKASVG APPDILGPLG QNWGLPPMDP HIITARAYEP FIELLRANMQ NCGALRIDHV MSMLRLWWIP YGETADQGAY VHYPVDDLLS ILALESKRHR CMVIGEDLGT VPVEIVGKLR SSGVYSYKVL YFENDHEKTF RAPKAYPEQS MAVAATHDLP TLRGYWECGD LTLGKTLGLY PDEVVLRGLY QDRELAKQGL LDALHKYGCL PKRAGHKASL MSMTPTLNRG LQRYIADSNS ALLGLQPEDW LDMAEPVNIP GTSYQYKNWR RKLSATLESM FADDGVNKLL KDLDRRRRAA AKKK
Mol. Wt	78.5 kDa (calc) ^[2]
pI	5.57^[2]
Extinction coefficient	168680 - 170055 (calc based on 32 Y, 22 W, and 11 C residues)
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Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

Structures

Models

View models at:

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Notes

Gene Product Resources

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Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:AMYLOMALT-MONOMER
UniProt (EcoliWiki Page)	UniProt:P15977
PFAM (EcoliWiki Page)	PFAM:PF02446
RefSeq (EcoliWiki Page)	RefSeq:NP_417875
ModBase (EcoliWiki Page)	ModBase:P15977
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 ^3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

@@ Line 130: / Line 130: @@
 |
 C
+|
+Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+|
+complete
+|-
+|
+|
+[[Category:GO:0005975_!_carbohydrate_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005975_!_carbohydrate_metabolic_process GO:0005975]
+|
+carbohydrate metabolic process
+|
+[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+|
+IEA: Inferred from Electronic Annotation
+|
+[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR003385 InterPro:IPR003385]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013781 InterPro:IPR013781]<br />[http://www.uniprot.org/keywords/KW-0119 SP_KW:KW-0119]
+|
+P
 |
 Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
@@ Line 214: / Line 233: @@
 |
-[[Category:GO:0005975_!_carbohydrate_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005975_!_carbohydrate_metabolic_process GO:0005975]
+[[Category:GO:0016740_!_transferase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016740_!_transferase_activity GO:0016740]
 |
-carbohydrate metabolic process
+transferase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR003385 InterPro:IPR003385]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013781 InterPro:IPR013781]<br />[http://www.uniprot.org/keywords/KW-0119 SP_KW:KW-0119]
+[http://www.uniprot.org/keywords/KW-0808 SP_KW:KW-0808]
 |
-P
+F
 |
 Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>

malQ:Gene Product(s): Difference between revisions

Revision as of 04:05, 18 November 2008

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

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malQ:Gene Product(s): Difference between revisions

Revision as of 04:05, 18 November 2008

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

Search