lfhA:Gene Product(s): Difference between revisions

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P
P
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete
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[[Category:GO:0016020_!_membrane]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016020_!_membrane GO:0016020]
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membrane
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[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
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IEA: Inferred from Electronic Annotation
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[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR001712 InterPro:IPR001712]<br />[http://www.uniprot.org/keywords/KW-0397 SP_KW:KW-0397]<br />[http://www.uniprot.org/keywords/KW-0472 SP_KW:KW-0472]
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C
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>

Revision as of 03:55, 18 November 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

FhiA product

Synonyms

B0229 product[1], FhiA product[1], LfhA product[2][1]

Product description

flagellar system protein, promoterless fragment[1][2]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0006810

transport

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0813

P

Seeded from EcoCyc 12.5 [3]

complete

GO:0009306

protein secretion

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001712

P

Seeded from EcoCyc 12.5 [3]

complete

GO:0015031

protein transport

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0653

P

Seeded from EcoCyc 12.5 [3]

complete

GO:0016020

membrane

GO_REF:0000002
GO_REF:0000004
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR001712
SP_KW:KW-0397
SP_KW:KW-0472

C

Seeded from EcoCyc 12.5 [3]

complete

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Interactions

Partner Type Partner Notes
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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MLSRSDLLTL LTINFIVVTK GAERISEVSA RFTLDAMPGK QMAIDADLNA GLINQAQAQT
RRKDVASEAD FYGAMDGASK FVRGDAIAGM MILAINLIGG VCIGIFKYNL SADAAFQQYV
LMTIGDGLVA QIPSLLLSTA AAIIVTRVSD NGDIAHDVRN QLLASPSVLY TATGIMFVLA
VVPGMPHLPF LLFSALLGFT GWRMSKQPLA AEAEEKSLET LTRTITETSE QQVSWETIPL
IEPISLSLGY KLVALVDKAQ GNPLTQRIRG VRQVISDGNG VLLPEIRIRE NFRLKPSQYA
IFINGIKADE ADIPADKLMA LPSSETYGEI DGVQGNDPAY GMPVTWIQAA QKAKALNMGY
QVIDSASVIA THVNKIVRSY IPDLFNYDDI TQLHNRLSST APRLAEDLSA ALNYSQLLKV
YRALLTEGVS LRDIVTIATV LVASSTVTKD HILLAADVRL ALRRSITHPF VRKQELTVYT
LNNELENLLT NVVNQAQQGG KVMLDSVPVD PNMLNQFQST MPQVKEQMKA AGKDPVLLVP
PQLRPLLARY ARLFAPGLHV LSYNEVPDEL ELKIMGALM
Mol. Wt

62.15 kDa (calc) [1]

pI
Extinction coefficient

40340 - 40465 (calc based on 16 Y, 3 W, and 1 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structures

<beststructure>lfhA 562</beststructure>

Models

View models at:

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

UniProt (EcoliWiki Page)

UniProt:Q47153

PFAM (EcoliWiki Page)

PFAM:PF00771

RefSeq (EcoliWiki Page)

RefSeq:NP_414764


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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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