nrdI:Gene Product(s): Difference between revisions

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!{{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
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NrdI product  
NrdI product  
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!{{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
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protein that stimulates ribonucleotide reduction product<ref name='LIB:Riley_2006'/>, B2674 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgaO product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NrdI product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
protein that stimulates ribonucleotide reduction product<ref name='LIB:Riley_2006'/>, B2674 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgaO product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NrdI product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
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conserved protein that may stimulate ribonucleotide reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
conserved protein that may stimulate ribonucleotide reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


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!{{table heading style}} |EC number (for enzymes)
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0015949  
[[Category:GO:0015949_!_nucleobase,_nucleoside_and_nucleotide_interconversion]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0015949_!_nucleobase,_nucleoside_and_nucleotide_interconversion GO:0015949]
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nucleobase, nucleoside and nucleotide interconversion  
nucleobase, nucleoside and nucleotide interconversion  
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!{{table heading style}} |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=G7402-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=G7402-MONOMER at EcoCyc]  
<pre>MSQLVYFSSS SENTQRFIER LGLPAVRIPL NERERIQVDE PYILIVPSYG GGGTAGAVPR
<pre>MSQLVYFSSS SENTQRFIER LGLPAVRIPL NERERIQVDE PYILIVPSYG GGGTAGAVPR
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VRKGVTEFWQ RQPQNA</pre>  
VRKGVTEFWQ RQPQNA</pre>  
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!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
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15.34 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
15.34 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
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!{{table heading style}} |pI
!align=left {{table heading style}} |pI
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!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
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18450 - 18575 (calc based on 5 Y, 2 W, and 1 C residues)  
18450 - 18575 (calc based on 5 Y, 2 W, and 1 C residues)  
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
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[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7402-MONOMER EcoCyc:G7402-MONOMER]
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7402-MONOMER EcoCyc:G7402-MONOMER]
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[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
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[[uniprot:P0A772|UniProt:P0A772]]
[[uniprot:P0A772|UniProt:P0A772]]
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[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])  
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[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_417160 RefSeq:NP_417160]
[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_417160 RefSeq:NP_417160]
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[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
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[http://salilab.org/modbase/searchbyid?databaseID=P0A772 ModBase:P0A772]
[http://salilab.org/modbase/searchbyid?databaseID=P0A772 ModBase:P0A772]
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Revision as of 02:24, 15 November 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

NrdI product

Synonyms

protein that stimulates ribonucleotide reduction product[1], B2674 product[2][1], YgaO product[2][1], NrdI product[2][1]

Product description

conserved protein that may stimulate ribonucleotide reductase[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0015949

nucleobase, nucleoside and nucleotide interconversion

P

Seeded from EcoCyc 11.1[3].

required fields missing

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Interactions

Partner Type Partner Notes
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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MSQLVYFSSS SENTQRFIER LGLPAVRIPL NERERIQVDE PYILIVPSYG GGGTAGAVPR
QVIRFLNDEH NRALLRGVIA SGNRNFGEAY GRAGDVIARK CGVPWLYRFE LMGTQSDIEN
VRKGVTEFWQ RQPQNA
Mol. Wt

15.34 kDa (calc) [2]

pI
Extinction coefficient

18450 - 18575 (calc based on 5 Y, 2 W, and 1 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structures

<beststructure>nrdI 562</beststructure>

Models

View models at:

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G7402-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0A772

RefSeq (EcoliWiki Page)

RefSeq:NP_417160

ModBase (EcoliWiki Page)

ModBase:P0A772


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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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