ansA:Gene Product(s): Difference between revisions

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!{{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
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AnsA product  
AnsA product  
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!{{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
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cytoplasmic L-asparaginase I product<ref name='LIB:Riley_2006'/>, B1767 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AnsA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
cytoplasmic L-asparaginase I product<ref name='LIB:Riley_2006'/>, B1767 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AnsA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
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AnsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
AnsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  


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|-
|-
!{{table heading style}} |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
|
||
** [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.1 3.5.1.1]<ref name='LIB:Riley_2006'/>
** [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.1 3.5.1.1]<ref name='LIB:Riley_2006'/>
|-
 
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|- {{table_heading_style}}
|- {{table_heading_style}}
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|
|
[[Category:GO:0004067_!_asparaginase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004067_!_asparaginase_activity GO:0004067]
|
asparaginase activity
|
GO_REF:0000002
|
IEA: Inferred from Electronic Annotation
|
InterPro:IPR006033
|
F
|
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
|
complete
|-
|
|
[[Category:GO:0004067_!_asparaginase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004067_!_asparaginase_activity GO:0004067]
|
asparaginase activity
|
GO_REF:0000003
|
IEA: Inferred from Electronic Annotation
|
EC:3.5.1.1
|
F
|
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
|
complete
|-
|
|
[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
|
cytoplasm
|
GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0963
|
C
|
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
|
complete
|-
|
|
[[Category:GO:0006520_!_amino_acid_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006520_!_amino_acid_metabolic_process GO:0006520]
|
amino acid metabolic process
|
GO_REF:0000002
|
IEA: Inferred from Electronic Annotation
|
InterPro:IPR006033
|
P
|
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
|
complete
|-
|
|
[[Category:GO:0006520_!_amino_acid_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006520_!_amino_acid_metabolic_process GO:0006520]
|
amino acid metabolic process
|
GO_REF:0000002
|
IEA: Inferred from Electronic Annotation
|
InterPro:IPR006034
|
P
|
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
|
complete
|-  
|-  
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required fields missing   
required fields missing   
|-
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[[Category:GO:0016787_!_hydrolase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016787_!_hydrolase_activity GO:0016787]
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hydrolase activity
|
GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0378
|
F
|
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
|
complete


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Protein
Protein
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could be indirect   
could be indirect   
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!Compartment!!Description!!Evidence!!Notes
!|Compartment!!Description!!Evidence!!Notes
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cytoplasm
cytoplasm
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From EcoCyc<ref name='LIB:EcoCyc11.1'/>   
From EcoCyc<ref name='LIB:EcoCyc11.1'/>   
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!{{table heading style}} |Sequence
!align=left {{table heading style}} |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=ANSA-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=ANSA-MONOMER at EcoCyc]  
<pre>MQKKSIYVAY TGGTIGMQRS EQGYIPVSGH LQRQLALMPE FHRPEMPDFT IHEYTPLMDS
<pre>MQKKSIYVAY TGGTIGMQRS EQGYIPVSGH LQRQLALMPE FHRPEMPDFT IHEYTPLMDS
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TVEATLTKLH YLLSQELDTE TIRKAMSQNL RGELTPDD</pre>  
TVEATLTKLH YLLSQELDTE TIRKAMSQNL RGELTPDD</pre>  
|-
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!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
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37.13 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
37.13 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
|-
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!{{table heading style}} |pI
!align=left {{table heading style}} |pI
|
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|-
|-
!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
|
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26360 - 26485 (calc based on 14 Y, 1 W, and 1 C residues)  
26360 - 26485 (calc based on 14 Y, 1 W, and 1 C residues)  
|-
 
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
|
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[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=ANSA-MONOMER EcoCyc:ANSA-MONOMER]
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=ANSA-MONOMER EcoCyc:ANSA-MONOMER]
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|-
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[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
|
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[[uniprot:P0A962|UniProt:P0A962]]
[[uniprot:P0A962|UniProt:P0A962]]
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|
   
   
|-
|-  
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[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])  
|
|
[http://pfam.sanger.ac.uk/family?acc=PF00710 PFAM:PF00710]
[http://pfam.sanger.ac.uk/family?acc=PF00710 PFAM:PF00710]
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|-
|-  
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[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])  
|
|
[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_416281 RefSeq:NP_416281]
[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_416281 RefSeq:NP_416281]
|
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|-
|-  
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[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
|
|
[http://salilab.org/modbase/searchbyid?databaseID=P0A962 ModBase:P0A962]
[http://salilab.org/modbase/searchbyid?databaseID=P0A962 ModBase:P0A962]
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Revision as of 01:18, 15 November 2008

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

AnsA product

Synonyms

cytoplasmic L-asparaginase I product[1], B1767 product[2][1], AnsA product[2][1]

Product description

AnsA[2][3];

Component of ; asparaginase I[2][3]

EC number (for enzymes)
edit table

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

[back to top]


Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0009063

amino acid catabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

edit table

Interactions

Partner Type Partner Notes

Protein

Subunits of asparaginase I

could be indirect

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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes

cytoplasm

From EcoCyc[3]

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See Help:Product_localization for how to add or edit information in this section of EcoliWiki.


Notes

Structure and Physical Properties

[back to top]


Physical Properties

Sequence

at EcoCyc 

MQKKSIYVAY TGGTIGMQRS EQGYIPVSGH LQRQLALMPE FHRPEMPDFT IHEYTPLMDS
SDMTPEDWQH IAEDIKAHYD DYDGFVILHG TDTMAYTASA LSFMLENLGK PVIVTGSQIP
LAELRSDGQI NLLNALYVAA NYPINEVTLF FNNRLYRGNR TTKAHADGFD AFASPNLPPL
LEAGIHIRRL NTPPAPHGEG ELIVHPITPQ PIGVVTIYPG ISADVVRNFL RQPVKALILR
SYGVGNAPQN KAFLQELQEA SDRGIVVVNL TQCMSGKVNM GGYATGNALA HAGVIGGADM
TVEATLTKLH YLLSQELDTE TIRKAMSQNL RGELTPDD
Mol. Wt

37.13 kDa (calc) [2]

pI
Extinction coefficient

26360 - 26485 (calc based on 14 Y, 1 W, and 1 C residues)

edit table

See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Structure

Structures

<beststructure>ansA 562</beststructure>

Models

View models at:

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See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Notes

Gene Product Resources

[back to top]


Resource type Source Notes/Reference
edit table

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

[back to top]


Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:ANSA-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0A962

PFAM (EcoliWiki Page)

PFAM:PF00710

RefSeq (EcoliWiki Page)

RefSeq:NP_416281

ModBase (EcoliWiki Page)

ModBase:P0A962


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See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
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See Help:Links_table for how to enter or edit information in this section of EcoliWiki.



References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ansA:Gene_Product(s)&oldid=579783"