arnD:Gene Product(s): Difference between revisions

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!{{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
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YfbH product  
YfbH product  
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!{{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
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conserved protein product<ref name='LIB:Riley_2006'/>, B2256 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfbH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PmrJ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
conserved protein product<ref name='LIB:Riley_2006'/>, B2256 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfbH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PmrJ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
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conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
conserved protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


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!{{table heading style}} |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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!Compartment!!Description!!Evidence!!Notes
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!{{table heading style}} |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=G7169-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=G7169-MONOMER at EcoCyc]  
<pre>MTKVGLRIDV DTFRGTREGV PRLLEILSKH NIQASIFFSV GPDNMGRHLW RLVKPQFLWK
<pre>MTKVGLRIDV DTFRGTREGV PRLLEILSKH NIQASIFFSV GPDNMGRHLW RLVKPQFLWK
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YQHNFVDLLK RAAQEGVTFC PLSELLSETL PLGQVVRGNI AGREGWLGCQ QIAGSR</pre>  
YQHNFVDLLK RAAQEGVTFC PLSELLSETL PLGQVVRGNI AGREGWLGCQ QIAGSR</pre>  
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!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
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33.11 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
33.11 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
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!{{table heading style}} |pI
!align=left {{table heading style}} |pI
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!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
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66460 - 67085 (calc based on 4 Y, 11 W, and 5 C residues)  
66460 - 67085 (calc based on 4 Y, 11 W, and 5 C residues)  
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!Database!!Accession!!Notes
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[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])  
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[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7169-MONOMER EcoCyc:G7169-MONOMER]
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7169-MONOMER EcoCyc:G7169-MONOMER]
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[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
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[[uniprot:P76472|UniProt:P76472]]
[[uniprot:P76472|UniProt:P76472]]
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[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://pfam.sanger.ac.uk/family?acc=PF01522 PFAM:PF01522]
[http://pfam.sanger.ac.uk/family?acc=PF01522 PFAM:PF01522]
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[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])  
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[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_416759 RefSeq:NP_416759]
[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_416759 RefSeq:NP_416759]
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[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
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[http://salilab.org/modbase/searchbyid?databaseID=P76472 ModBase:P76472]
[http://salilab.org/modbase/searchbyid?databaseID=P76472 ModBase:P76472]
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===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}
[[Category:Proteins]]

Revision as of 00:58, 5 November 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

YfbH product

Synonyms

conserved protein product[1], B2256 product[2][1], YfbH product[2][1], PmrJ product[2][1]

Product description

conserved protein[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
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Interactions

Partner Type Partner Notes
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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes
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See Help:Product_localization for how to add or edit information in this section of EcoliWiki.


Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MTKVGLRIDV DTFRGTREGV PRLLEILSKH NIQASIFFSV GPDNMGRHLW RLVKPQFLWK
MLRSNAASLY GWDILLAGTA WPGKEIGHAN ADIIREAAKH HEVGLHAWDH HAWQARSGNW
DRQTMIDDIA RGLRTLEEII GQPVTCSAAA GWRADQKVIE AKEAFHLRYN SDCRGAMPFR
PLLESGNPGT AQIPVTLPTW DEVIGRDVKA EDFNGWLLNR ILRDKGTPVY TIHAEVEGCA
YQHNFVDLLK RAAQEGVTFC PLSELLSETL PLGQVVRGNI AGREGWLGCQ QIAGSR
Mol. Wt

33.11 kDa (calc) [2]

pI
Extinction coefficient

66460 - 67085 (calc based on 4 Y, 11 W, and 5 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structures

<beststructure>yfbH 562</beststructure>

Models

View models at:

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G7169-MONOMER

UniProt (EcoliWiki Page)

UniProt:P76472

PFAM (EcoliWiki Page)

PFAM:PF01522

RefSeq (EcoliWiki Page)

RefSeq:NP_416759

ModBase (EcoliWiki Page)

ModBase:P76472


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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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