lafU:Gene Product(s): Difference between revisions

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!{{table heading style}} |Standard name
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MbhA product  
MbhA product  
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!{{table heading style}} |Synonyms
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B0230 product<ref name='LIB:EcoCyc10.6'/>, MbhA product<ref name='LIB:EcoCyc10.6'/>, LafU product<ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>  
B0230 product<ref name='LIB:EcoCyc10.6'/>, MbhA product<ref name='LIB:EcoCyc10.6'/>, LafU product<ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>  
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!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
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flagellar system protein, promoterless fragment<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
flagellar system protein, promoterless fragment<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


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!{{table heading style}} |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
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cell outer membrane
cell outer membrane
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GO_REF:0000002
[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
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IEA: Inferred from Electronic Annotation
IEA: Inferred from Electronic Annotation
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InterPro:IPR006665
[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR006665 InterPro:IPR006665]
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C
C
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!{{table heading style}} |Sequence
!align=left {{table heading style}} |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object= at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object= at EcoCyc]  
<pre></pre>  
<pre></pre>  
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!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
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27.88 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
27.88 kDa (calc) <ref name='LIB:EcoCyc10.6'/>  
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!{{table heading style}} |pI
!align=left {{table heading style}} |pI
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!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
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0 (calc based on 0 Y, 0 W, and 0 C residues)  
0 (calc based on 0 Y, 0 W, and 0 C residues)  
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!Database!!Accession!!Notes
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[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
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[[uniprot:Q47154|UniProt:Q47154]]
[[uniprot:Q47154|UniProt:Q47154]]
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[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://pfam.sanger.ac.uk/family?acc=PF00691 PFAM:PF00691]
[http://pfam.sanger.ac.uk/family?acc=PF00691 PFAM:PF00691]
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[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])  
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[http://salilab.org/modbase/searchbyid?databaseID=Q47154 ModBase:Q47154]
[http://salilab.org/modbase/searchbyid?databaseID=Q47154 ModBase:Q47154]
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===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}
[[Category:Proteins]]

Revision as of 00:20, 5 November 2008

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

MbhA product

Synonyms

B0230 product[1], MbhA product[1], LafU product[2][1]

Product description

flagellar system protein, promoterless fragment[1][2]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0009279

cell outer membrane

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006665

C

Seeded from EcoCyc 12.5 [3]

complete

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Interactions

Partner Type Partner Notes
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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes
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See Help:Product_localization for how to add or edit information in this section of EcoliWiki.


Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

 




Mol. Wt



27.88 kDa (calc) [1] 






pI






Extinction coefficient



0 (calc based on 0 Y, 0 W, and 0 C residues) 






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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.



Domains/Motifs/Modification Sites






Type
Residues
Description
Notes






Domain





58 - 176





OmpA-like





UniProt:Q47154 






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Structure








Structures



<beststructure>lafU
562</beststructure>






Models



View models at:







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Notes


Gene Product Resources


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Resource type
Source
Notes/Reference




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Notes


Accessions in Other Databases


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Database
Accession
Notes






UniProt (EcoliWiki Page) 





UniProt:Q47154










PFAM (EcoliWiki Page) 





PFAM:PF00691










ModBase (EcoliWiki Page) 





ModBase:Q47154













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Notes


Links


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Name
URL
Comments




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References


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See Help:References for how to manage references in EcoliWiki.



    

  1. ↑ 1.0 1.1 1.2 1.3 1.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7  

    2. 

  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7  

    3. 

  3. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7  

    4. 








Categories


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