malQ:Gene Product(s): Difference between revisions

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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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[[Category:GO:0016757_!_transferase_activity,_transferring_glycosyl_groups]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016757_!_transferase_activity,_transferring_glycosyl_groups GO:0016757]
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transferase_activity,_transferring_glycosyl_groups
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000004 GO_REF:0000004]<br />
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0328
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0004134_!_4-alpha-glucanotransferase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004134_!_4-alpha-glucanotransferase_activity GO:0004134]
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4-alpha-glucanotransferase_activity
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000003 GO_REF:0000003]<br />
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IEA: Inferred from Electronic Annotation
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EC:2.4.1.25
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0005975_!_carbohydrate_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005975_!_carbohydrate_metabolic_process GO:0005975]
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carbohydrate_metabolism
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000002 GO_REF:0000002]<br />
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IEA: Inferred from Electronic Annotation
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InterPro:IPR003385
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P
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0005975_!_carbohydrate_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005975_!_carbohydrate_metabolic_process GO:0005975]
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carbohydrate_metabolism
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000002 GO_REF:0000002]<br />
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IEA: Inferred from Electronic Annotation
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InterPro:IPR013781
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P
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0005975_!_carbohydrate_metabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005975_!_carbohydrate_metabolic_process GO:0005975]
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carbohydrate_metabolism
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000004 GO_REF:0000004]<br />
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0119
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P
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0016740_!_transferase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016740_!_transferase_activity GO:0016740]
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transferase_activity
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000004 GO_REF:0000004]<br />
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0808
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0003824_!_catalytic_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003824_!_catalytic_activity GO:0003824]
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catalytic_activity
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000002 GO_REF:0000002]<br />
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IEA: Inferred from Electronic Annotation
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InterPro:IPR013781
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
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cytoplasm
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000004 GO_REF:0000004]<br />
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0963
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C
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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|-
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[[Category:GO:0004134_!_4-alpha-glucanotransferase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004134_!_4-alpha-glucanotransferase_activity GO:0004134]
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4-alpha-glucanotransferase_activity
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000002 GO_REF:0000002]<br />
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IEA: Inferred from Electronic Annotation
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InterPro:IPR003385
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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[[Category:GO:0043169_!_cation_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0043169_!_cation_binding GO:0043169]
[[Category:GO:0003824_!_catalytic_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003824_!_catalytic_activity GO:0003824]
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cation_binding
catalytic activity
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000002 GO_REF:0000002]<br />
GO_REF:0000002
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IEA: Inferred from Electronic Annotation
IEA: Inferred from Electronic Annotation
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete


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Revision as of 22:33, 2 October 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

MalQ product

Synonyms

4-alpha-glucanotransferase (amylomaltase) product[1], B3416 product[2][1], MalA product[2][1], MalQ product[2][1]

Product description

AMYLOMALT-MONOMER[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0016052

carbohydrate catabolic process

P

Seeded from Riley et al 2006 [1].

required fields missing

GO:0000272

polysaccharide catabolic process

P

Seeded from Riley et al 2006 [1].

required fields missing

GO:0009313

oligosaccharide catabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0000025

maltose catabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0003824

catalytic activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013781

F

Seeded from EcoCyc 12.5 [4]

complete

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Interactions

Partner Type Partner Notes
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Notes

Localization

Compartment Description Evidence Notes

cytoplasm

From EcoCyc[3]

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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MESKRLDNAA LAAGISPNYI NAHGKPQSIS AETKRRLLDA MHQRTATKVA VTPVPNVMVY
TSGKKMPMVV EGSGEYSWLL TTEEGTQYKG HVTGGKAFNL PTKLPEGYHT LTLTQDDQRA
HCRVIVAPKR CYEPQALLNK QKLWGACVQL YTLRSEKNWG IGDFGDLKAM LVDVAKRGGS
FIGLNPIHAL YPANPESASP YSPSSRRWLN VIYIDVNAVE DFHLSEEAQA WWQLPTTQQT
LQQARDADWV DYSTVTALKM TALRMAWKGF AQRDDEQMAA FRQFVAEQGD SLFWQAAFDA
LHAQQVKEDE MRWGWPAWPE MYQNVDSPEV RQFCEEHRDD VDFYLWLQWL AYSQFAACWE
ISQGYEMPIG LYRDLAVGVA EGGAETWCDR ELYCLKASVG APPDILGPLG QNWGLPPMDP
HIITARAYEP FIELLRANMQ NCGALRIDHV MSMLRLWWIP YGETADQGAY VHYPVDDLLS
ILALESKRHR CMVIGEDLGT VPVEIVGKLR SSGVYSYKVL YFENDHEKTF RAPKAYPEQS
MAVAATHDLP TLRGYWECGD LTLGKTLGLY PDEVVLRGLY QDRELAKQGL LDALHKYGCL
PKRAGHKASL MSMTPTLNRG LQRYIADSNS ALLGLQPEDW LDMAEPVNIP GTSYQYKNWR
RKLSATLESM FADDGVNKLL KDLDRRRRAA AKKK
Mol. Wt

78.5 kDa (calc) [2]

pI

5.57[2]

Extinction coefficient

168680 - 170055 (calc based on 32 Y, 22 W, and 11 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:AMYLOMALT-MONOMER

UniProt (EcoliWiki Page)

UniProt:P15977

PFAM (EcoliWiki Page)

PFAM:PF02446

RefSeq (EcoliWiki Page)

RefSeq:NP_417875

ModBase (EcoliWiki Page)

ModBase:P15977

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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