cls:Gene Product(s): Difference between revisions

Standard name	Cls product
Synonyms	cardiolipin synthase 1 product^[1], B1249 product^[2]^[1], YciJ product^[2]^[1], Nov product^[2]^[1], Cls product^[2]^[1]
Product description	CARDIOLIPSYN-MONOMER^[2]^[3]
EC number (for enzymes)	2.7.8.-^[1]
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Notes

Function

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Gene Ontology

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0003824	catalytic_activity	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR001736	F	Seeded from EcoCyc 12.5 ^[4]
	GO:0008152	metabolism	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR001736	P	Seeded from EcoCyc 12.5 ^[4]
	GO:0008654	phospholipid_biosynthesis	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0594	P	Seeded from EcoCyc 12.5 ^[4]
	GO:0016020	membrane	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0397	C	Seeded from EcoCyc 12.5 ^[4]
	GO:0016021	integral to membrane				C	Seeded from Riley et al 2006 ^[1].	required fields missing
	GO:0008654	phospholipid_biosynthesis	GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_00190	P	Seeded from EcoCyc 12.5 ^[4]
	GO:0042493	response to drug				P	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0016020	membrane	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0472	C	Seeded from EcoCyc 12.5 ^[4]
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Interactions

Partner Type	Partner	Notes
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Notes

Localization

Compartment	Description	Evidence	Notes
plasma membrane			From EcoCyc^[3]
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Notes

Structure and Physical Properties

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Physical Properties

Sequence	at EcoCyc MTTVYTLVSW LAILGYWLLI AGVTLRILMK RRAVPSAMAW LLIIYILPLV GIIAYLAVGE LHLGKRRAER ARAMWPSTAK WLNDLKACKH IFAEENSSVA APLFKLCERR QGIAGVKGNQ LQLMTESDDV MQALIRDIQL ARHNIEMVFY IWQPGGMADQ VAESLMAAAR RGIHCRLMLD SAGSVAFFRS PWPELMRNAG IEVVEALKVN LMRVFLRRMD LRQHRKMIMI DNYIAYTGSM NMVDPRYFKQ DAGVGQWIDL MARMEGPIAT AMGIIYSCDW EIETGKRILP PPPDVNIMPF EQASGHTIHT IASGPGFPED LIHQALLTAA YSAREYLIMT TPYFVPSDDL LHAICTAAQR GVDVSIILPR KNDSMLVGWA SRAFFTELLA AGVKIYQFEG GLLHTKSVLV DGELSLVGTV NLDMRSLWLN FEITLAIDDK GFGADLAAVQ DDYISRSRLL DARLWLKRPL WQRVAERLFY FFSPLL
Mol. Wt	54.82 kDa (calc) ^[2]
pI
Extinction coefficient	93850 - 94475 (calc based on 15 Y, 13 W, and 5 C residues)
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Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

Structure Type	Organism	Accession	Residues covered	Notes
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Notes

Gene Product Resources

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Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:CARDIOLIPSYN-MONOMER
UniProt (EcoliWiki Page)	UniProt:P0A6H8
PFAM (EcoliWiki Page)	PFAM:PF00614
RefSeq (EcoliWiki Page)	RefSeq:NP_415765
ModBase (EcoliWiki Page)	ModBase:P0A6H8
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

cls:Gene Product(s): Difference between revisions

Revision as of 23:02, 29 September 2008

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

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+Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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+[[Category:GO:0016020_!_membrane]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016020_!_membrane GO:0016020]
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+membrane
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+[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000004 GO_REF:0000004]<br />
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+IEA: Inferred from Electronic Annotation
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+SP_KW:KW-0397
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+C
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 IEA: Inferred from Electronic Annotation
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+SP_KW:KW-0472
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 C

cls:Gene Product(s): Difference between revisions

Revision as of 23:02, 29 September 2008

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

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