cls:Gene Product(s): Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Edited by wikibot
Edited by wikibot
Line 53: Line 53:
** [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.- 2.7.8.-]<ref name='LIB:Riley_2006'/>
** [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.- 2.7.8.-]<ref name='LIB:Riley_2006'/>
|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f7651ffb&page=22455&pagename={{FULLPAGENAMEE}} edit table]
|colspan='2'|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f7651ffb&page=22455&pagename={{FULLPAGENAMEE}} edit table]
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f7651ffb-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f7651ffb-->
Line 133: Line 133:
required fields missing   
required fields missing   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.T46aa5f775286b&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || || || || || || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.T46aa5f775286b&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || || || || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.T46aa5f775286b-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.T46aa5f775286b-->
Line 150: Line 150:
!Partner Type!!Partner!!Notes
!Partner Type!!Partner!!Notes
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.O46aa5f85a6725&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.O46aa5f85a6725&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.O46aa5f85a6725-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.O46aa5f85a6725-->
Line 179: Line 179:
From EcoCyc<ref name='LIB:EcoCyc11.1'/>   
From EcoCyc<ref name='LIB:EcoCyc11.1'/>   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.D46aa5f865b450&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.D46aa5f865b450&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.D46aa5f865b450-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.D46aa5f865b450-->
Line 226: Line 226:
93850 - 94475 (calc based on 15 Y, 13 W, and 5 C residues)  
93850 - 94475 (calc based on 15 Y, 13 W, and 5 C residues)  
|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.C46aa5f87c8cd1&page=22455&pagename={{FULLPAGENAMEE}} edit table]
|colspan='2'|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.C46aa5f87c8cd1&page=22455&pagename={{FULLPAGENAMEE}} edit table]
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.C46aa5f87c8cd1-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.C46aa5f87c8cd1-->
Line 243: Line 243:
!Type!!Residues!!Description!!Notes
!Type!!Residues!!Description!!Notes
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.A46aa5f88317e6&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.A46aa5f88317e6&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.A46aa5f88317e6-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.A46aa5f88317e6-->
Line 260: Line 260:
!Structure Type!!Organism!!Accession!!Residues covered!!Notes
!Structure Type!!Organism!!Accession!!Residues covered!!Notes
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.A46a7f26810b00&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.A46a7f26810b00&page=22455&pagename={{FULLPAGENAMEE}} edit table] || || || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.A46a7f26810b00-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.A46a7f26810b00-->
Line 281: Line 281:
!Resource type!!Source!!Notes/Reference
!Resource type!!Source!!Notes/Reference
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f88cca52&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f88cca52&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f88cca52-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.V46aa5f88cca52-->
Line 337: Line 337:
   
   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.J46aa5f89259c0&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.J46aa5f89259c0&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.J46aa5f89259c0-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.J46aa5f89259c0-->
Line 358: Line 358:
!Name!!URL!!Comments
!Name!!URL!!Comments
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.V46a7f26b6fad1&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.22455.V46a7f26b6fad1&page=22455&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.V46a7f26b6fad1-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.22455.V46a7f26b6fad1-->

Revision as of 09:04, 30 April 2008

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

Cls product

Synonyms

cardiolipin synthase 1 product[1], B1249 product[2][1], YciJ product[2][1], Nov product[2][1], Cls product[2][1]

Product description

CARDIOLIPSYN-MONOMER[2][3]

EC number (for enzymes)
edit table

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

[back to top]


Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0016021

integral to membrane

C

Seeded from Riley et al 2006 [1].

required fields missing

GO:0008654

phospholipid biosynthetic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0042493

response to drug

P

Seeded from EcoCyc 11.1[3].

required fields missing

edit table

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Interactions

Partner Type Partner Notes
edit table

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes

plasma membrane

From EcoCyc[3]

edit table

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.


Notes

Structure and Physical Properties

[back to top]


Physical Properties

Sequence

at EcoCyc 

MTTVYTLVSW LAILGYWLLI AGVTLRILMK RRAVPSAMAW LLIIYILPLV GIIAYLAVGE
LHLGKRRAER ARAMWPSTAK WLNDLKACKH IFAEENSSVA APLFKLCERR QGIAGVKGNQ
LQLMTESDDV MQALIRDIQL ARHNIEMVFY IWQPGGMADQ VAESLMAAAR RGIHCRLMLD
SAGSVAFFRS PWPELMRNAG IEVVEALKVN LMRVFLRRMD LRQHRKMIMI DNYIAYTGSM
NMVDPRYFKQ DAGVGQWIDL MARMEGPIAT AMGIIYSCDW EIETGKRILP PPPDVNIMPF
EQASGHTIHT IASGPGFPED LIHQALLTAA YSAREYLIMT TPYFVPSDDL LHAICTAAQR
GVDVSIILPR KNDSMLVGWA SRAFFTELLA AGVKIYQFEG GLLHTKSVLV DGELSLVGTV
NLDMRSLWLN FEITLAIDDK GFGADLAAVQ DDYISRSRLL DARLWLKRPL WQRVAERLFY
FFSPLL
Mol. Wt

54.82 kDa (calc) [2]

pI
Extinction coefficient

93850 - 94475 (calc based on 15 Y, 13 W, and 5 C residues)

edit table

See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
edit table

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Structure

Structure Type Organism Accession Residues covered Notes
edit table

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Notes

Gene Product Resources

[back to top]


Resource type Source Notes/Reference
edit table

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

[back to top]


Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:CARDIOLIPSYN-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0A6H8

PFAM (EcoliWiki Page)

PFAM:PF00614

RefSeq (EcoliWiki Page)

RefSeq:NP_415765

ModBase (EcoliWiki Page)

ModBase:P0A6H8

edit table

See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.



References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=cls:Gene_Product(s)&oldid=395585"